RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
LMNB1-201ENST00000261366 SHPRHQ149N8 1683 aa19.9■□□□□ 0.78
LMNB1-201ENST00000261366 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
LMNB1-201ENST00000261366 PKNOX2Q96KN3 472 aa19.9■□□□□ 0.78
LMNB1-201ENST00000261366 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
LMNB1-201ENST00000261366 SMC5Q8IY18 1101 aa19.9■□□□□ 0.78
LMNB1-201ENST00000261366 GBP4Q96PP9 640 aa19.9■□□□□ 0.78
LMNB1-201ENST00000261366 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
LMNB1-201ENST00000261366 SSFA2P28290 1259 aa19.89■□□□□ 0.78
LMNB1-201ENST00000261366 RIPK4P57078 832 aa19.89■□□□□ 0.78
LMNB1-201ENST00000261366 ABCA6Q8N139 1617 aa19.89■□□□□ 0.78
LMNB1-201ENST00000261366 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
LMNB1-201ENST00000261366 CFAP65Q6ZU64 1925 aaKnown RBP19.89■□□□□ 0.77
LMNB1-201ENST00000261366 STK26Q9P289 416 aa19.89■□□□□ 0.77
LMNB1-201ENST00000261366 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
LMNB1-201ENST00000261366 FRMPD1Q5SYB0 1578 aa19.88■□□□□ 0.77
LMNB1-201ENST00000261366 ZMYND15Q9H091 742 aa19.88■□□□□ 0.77
LMNB1-201ENST00000261366 ZBTB40Q9NUA8 1239 aa19.88■□□□□ 0.77
LMNB1-201ENST00000261366 CHD1LQ86WJ1 897 aa19.88■□□□□ 0.77
LMNB1-201ENST00000261366 ZMYM3Q14202 1370 aa19.86■□□□□ 0.77
LMNB1-201ENST00000261366 FBLN1P23142 703 aa19.86■□□□□ 0.77
LMNB1-201ENST00000261366 NUCB1Q02818 461 aa19.86■□□□□ 0.77
LMNB1-201ENST00000261366 RBM25P49756 843 aaKnown RBP19.85■□□□□ 0.77
LMNB1-201ENST00000261366 HECW2Q9P2P5 1572 aa19.85■□□□□ 0.77
LMNB1-201ENST00000261366 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
LMNB1-201ENST00000261366 DDIT3P35638 169 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 RAB3GAP1Q15042 981 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 GAS2L2Q8NHY3 880 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 DDX49Q9Y6V7 483 aaKnown RBP19.84■□□□□ 0.77
LMNB1-201ENST00000261366 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
LMNB1-201ENST00000261366 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 KIF2CQ99661 725 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 LMTK2Q8IWU2 1503 aa19.84■□□□□ 0.77
LMNB1-201ENST00000261366 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.77
LMNB1-201ENST00000261366 NEO1Q92859 1461 aa19.83■□□□□ 0.76
LMNB1-201ENST00000261366 RRP9O43818 475 aaKnown RBP19.82■□□□□ 0.76
LMNB1-201ENST00000261366 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
LMNB1-201ENST00000261366 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
LMNB1-201ENST00000261366 MYOM2P54296 1465 aa19.82■□□□□ 0.76
LMNB1-201ENST00000261366 SNX21Q969T3 373 aa19.81■□□□□ 0.76
LMNB1-201ENST00000261366 K7ELQ4 463 aaPredicted RBP19.81■□□□□ 0.76
LMNB1-201ENST00000261366 IPO8O15397 1037 aaKnown RBP19.81■□□□□ 0.76
LMNB1-201ENST00000261366 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
LMNB1-201ENST00000261366 YEATS2Q9ULM3 1422 aa19.8■□□□□ 0.76
LMNB1-201ENST00000261366 KIAA1211Q6ZU35 1233 aa19.8■□□□□ 0.76
LMNB1-201ENST00000261366 ARID3AQ99856 593 aa19.8■□□□□ 0.76
LMNB1-201ENST00000261366 KIF1BO60333 1816 aa19.8■□□□□ 0.76
LMNB1-201ENST00000261366 MROH2AA6NES4 1674 aa19.79■□□□□ 0.76
LMNB1-201ENST00000261366 APBB1O00213 710 aa19.79■□□□□ 0.76
LMNB1-201ENST00000261366 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
LMNB1-201ENST00000261366 MCTP1Q6DN14 999 aa19.79■□□□□ 0.76
LMNB1-201ENST00000261366 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
LMNB1-201ENST00000261366 EVC2Q86UK5 1308 aa19.78■□□□□ 0.76
LMNB1-201ENST00000261366 ABCC3O15438 1527 aa19.78■□□□□ 0.76
LMNB1-201ENST00000261366 IDI1Q13907 227 aa19.78■□□□□ 0.76
LMNB1-201ENST00000261366 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
LMNB1-201ENST00000261366 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
LMNB1-201ENST00000261366 ANP32BQ92688 251 aaKnown RBP19.77■□□□□ 0.76
LMNB1-201ENST00000261366 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
LMNB1-201ENST00000261366 GOLGA6L22H0YM25 854 aa19.77■□□□□ 0.76
LMNB1-201ENST00000261366 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
LMNB1-201ENST00000261366 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.76
LMNB1-201ENST00000261366 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.75
LMNB1-201ENST00000261366 SKOR2Q2VWA4 1001 aaPredicted RBP19.77■□□□□ 0.75
LMNB1-201ENST00000261366 FOXD4L5Q5VV16 416 aaPredicted RBP19.77■□□□□ 0.75
LMNB1-201ENST00000261366 CAVIN1Q6NZI2 390 aaKnown RBP19.77■□□□□ 0.75
LMNB1-201ENST00000261366 FOXD4L4Q8WXT5 416 aaPredicted RBP19.77■□□□□ 0.75
LMNB1-201ENST00000261366 NEURL4Q96JN8 1562 aa19.76■□□□□ 0.75
LMNB1-201ENST00000261366 HMOX1P09601 288 aa19.76■□□□□ 0.75
LMNB1-201ENST00000261366 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
LMNB1-201ENST00000261366 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
LMNB1-201ENST00000261366 ADGRB3O60242 1522 aa19.76■□□□□ 0.75
LMNB1-201ENST00000261366 PKP1Q13835 747 aa19.76■□□□□ 0.75
LMNB1-201ENST00000261366 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
LMNB1-201ENST00000261366 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
LMNB1-201ENST00000261366 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
LMNB1-201ENST00000261366 BAG4O95429 457 aaKnown RBP19.75■□□□□ 0.75
LMNB1-201ENST00000261366 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
LMNB1-201ENST00000261366 MSNP26038 577 aaKnown RBP19.74■□□□□ 0.75
LMNB1-201ENST00000261366 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
LMNB1-201ENST00000261366 AK9Q5TCS8 1911 aa19.74■□□□□ 0.75
LMNB1-201ENST00000261366 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
LMNB1-201ENST00000261366 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
LMNB1-201ENST00000261366 DIP2CQ9Y2E4 1556 aa19.73■□□□□ 0.75
LMNB1-201ENST00000261366 KIAA1210Q9ULL0 1709 aa19.73■□□□□ 0.75
LMNB1-201ENST00000261366 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 A0A1W2PP64 1363 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 ANKRD36BQ8N2N9 1353 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-201ENST00000261366 FBXO31Q5XUX0 539 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-201ENST00000261366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.72■□□□□ 0.75
LMNB1-201ENST00000261366 PPIP5K1Q6PFW1 1433 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 ZBTB7BO15156 539 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-201ENST00000261366 CCDC173Q0VFZ6 552 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 SIRT2Q8IXJ6 389 aa19.72■□□□□ 0.75
LMNB1-201ENST00000261366 C16orf71Q8IYS4 520 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-201ENST00000261366 FYB1O15117 783 aa19.71■□□□□ 0.75
LMNB1-201ENST00000261366 RBM27Q9P2N5 1060 aaKnown RBP19.71■□□□□ 0.75
LMNB1-201ENST00000261366 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms