RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
COL8A1-201ENST00000261037 ANKRD50Q9ULJ7 1429 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 MNS1Q8NEH6 495 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 NOB1Q9ULX3 412 aaKnown RBP14.54□□□□□ -0.08
COL8A1-201ENST00000261037 PSMA5P28066 241 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL8A1-201ENST00000261037 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 ZFYVE27Q5T4F4 411 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 RUFY1Q96T51 708 aa14.54□□□□□ -0.08
COL8A1-201ENST00000261037 PPP2R1AP30153 589 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 TTC39AQ5SRH9 613 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.53□□□□□ -0.08
COL8A1-201ENST00000261037 WASHC2AQ641Q2 1341 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 PRAM1Q96QH2 718 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 ODF2Q5BJF6 829 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 KRI1Q8N9T8 703 aaKnown RBP14.53□□□□□ -0.08
COL8A1-201ENST00000261037 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 TXNDC2Q86VQ3 553 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 SIL1Q9H173 461 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 PDZRN3Q9UPQ7 1066 aa14.53□□□□□ -0.08
COL8A1-201ENST00000261037 SKIDA1Q1XH10 827 aa14.52□□□□□ -0.08
COL8A1-201ENST00000261037 SDF4Q9BRK5 362 aa14.52□□□□□ -0.08
COL8A1-201ENST00000261037 GPRASP1Q5JY77 1395 aa14.52□□□□□ -0.09
COL8A1-201ENST00000261037 TEX35Q5T0J7 233 aa14.52□□□□□ -0.09
COL8A1-201ENST00000261037 STK3Q13188 491 aa14.52□□□□□ -0.09
COL8A1-201ENST00000261037 TWISTNBQ3B726 338 aaPredicted RBP14.52□□□□□ -0.09
COL8A1-201ENST00000261037 CAVIN1Q6NZI2 390 aaKnown RBP14.52□□□□□ -0.09
COL8A1-201ENST00000261037 CLASRPQ8N2M8 674 aaKnown RBP14.52□□□□□ -0.09
COL8A1-201ENST00000261037 CAGE1Q8TC20 777 aa14.52□□□□□ -0.09
COL8A1-201ENST00000261037 EHBP1L1Q8N3D4 1523 aa14.52□□□□□ -0.09
COL8A1-201ENST00000261037 SMC2O95347 1197 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 XBP1P17861 261 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 AFAP1Q8N556 730 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 HSP90AB2PQ58FF8 381 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.51□□□□□ -0.09
COL8A1-201ENST00000261037 CNNM1Q9NRU3 951 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
COL8A1-201ENST00000261037 R3HCC1Q9Y3T6 440 aaKnown RBP14.51□□□□□ -0.09
COL8A1-201ENST00000261037 GAS2L2Q8NHY3 880 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 NEK4P51957 841 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 NAT10Q9H0A0 1025 aaKnown RBP14.5□□□□□ -0.09
COL8A1-201ENST00000261037 NASPP49321 788 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-201ENST00000261037 BRPF1P55201 1214 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-201ENST00000261037 TMEM132AQ24JP5 1023 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-201ENST00000261037 FMNL2Q96PY5 1086 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
COL8A1-201ENST00000261037 BCAR3O75815 825 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 AK7Q96M32 723 aa14.5□□□□□ -0.09
COL8A1-201ENST00000261037 OFD1O75665 1012 aa14.49□□□□□ -0.09
COL8A1-201ENST00000261037 BRD4O60885 1362 aaPredicted RBP14.49□□□□□ -0.09
COL8A1-201ENST00000261037 PRPF40AO75400 957 aaKnown RBP14.49□□□□□ -0.09
COL8A1-201ENST00000261037 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
COL8A1-201ENST00000261037 GNAI3P08754 354 aa14.49□□□□□ -0.09
COL8A1-201ENST00000261037 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
COL8A1-201ENST00000261037 SART3Q15020 963 aaKnown RBP14.49□□□□□ -0.09
COL8A1-201ENST00000261037 NBPF1Q3BBV0 1214 aa14.49□□□□□ -0.09
COL8A1-201ENST00000261037 MYL6BP14649 208 aa14.49□□□□□ -0.09
COL8A1-201ENST00000261037 NUTM2BA6NNL0 878 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 NUTM2EB1AL46 878 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 NUTM2AQ8IVF1 878 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 CCDC39Q9UFE4 941 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 DDX54Q8TDD1 881 aaKnown RBP14.48□□□□□ -0.09
COL8A1-201ENST00000261037 CDK5RAP3Q96JB5 506 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 STAC3Q96MF2 364 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 TRIM5Q9C035 493 aa14.48□□□□□ -0.09
COL8A1-201ENST00000261037 CDK19Q9BWU1 502 aa14.47□□□□□ -0.09
COL8A1-201ENST00000261037 FIBPO43427 364 aa14.47□□□□□ -0.09
COL8A1-201ENST00000261037 GNAI2P04899 355 aa14.47□□□□□ -0.09
COL8A1-201ENST00000261037 SULT6B1Q6IMI4 303 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 CABP4P57796 275 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 ARGLU1Q9NWB6 273 aaPredicted RBP14.46□□□□□ -0.09
COL8A1-201ENST00000261037 TRAK2O60296 914 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 TSPY26PQ9H489 355 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 CCDC158Q5M9N0 1113 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 SPC24Q8NBT2 197 aa14.46□□□□□ -0.09
COL8A1-201ENST00000261037 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.1
COL8A1-201ENST00000261037 TATP17735 454 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-201ENST00000261037 SLC12A5Q9H2X9 1139 aa14.45□□□□□ -0.1
COL8A1-201ENST00000261037 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
COL8A1-201ENST00000261037 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
COL8A1-201ENST00000261037 CABP1Q9NZU7 370 aa14.45□□□□□ -0.1
COL8A1-201ENST00000261037 TROQ12816 1431 aaPredicted RBP14.45□□□□□ -0.1
COL8A1-201ENST00000261037 KINO60870 393 aaKnown RBP14.44□□□□□ -0.1
COL8A1-201ENST00000261037 PLEKHH2Q8IVE3 1493 aa14.44□□□□□ -0.1
COL8A1-201ENST00000261037 SLC3A2P08195 630 aaKnown RBP14.44□□□□□ -0.1
COL8A1-201ENST00000261037 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
COL8A1-201ENST00000261037 STK38Q15208 465 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 TOM1L2Q6ZVM7 507 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 MAGEC2Q9UBF1 373 aaPredicted RBP14.43□□□□□ -0.1
COL8A1-201ENST00000261037 KIAA0586Q9BVV6 1533 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 ERC1Q8IUD2 1116 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 MPNDQ8N594 471 aa14.43□□□□□ -0.1
COL8A1-201ENST00000261037 HIP1O00291 1037 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms