RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 FRMPD1Q5SYB0 1578 aa29.45■■■□□ 2.31
PREB-201ENST00000260643 MED14O60244 1454 aa29.45■■■□□ 2.3
PREB-201ENST00000260643 TRAK2O60296 914 aa29.44■■■□□ 2.3
PREB-201ENST00000260643 ITPRIPQ8IWB1 547 aa29.43■■■□□ 2.3
PREB-201ENST00000260643 SNX21Q969T3 373 aa29.43■■■□□ 2.3
PREB-201ENST00000260643 PIK3C2BO00750 1634 aa29.43■■■□□ 2.3
PREB-201ENST00000260643 HSCBQ8IWL3 235 aa29.42■■■□□ 2.3
PREB-201ENST00000260643 ISY1Q9ULR0 285 aaKnown RBP29.42■■■□□ 2.3
PREB-201ENST00000260643 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
PREB-201ENST00000260643 KIF16BQ96L93 1317 aa29.41■■■□□ 2.3
PREB-201ENST00000260643 ABCC3O15438 1527 aa29.41■■■□□ 2.3
PREB-201ENST00000260643 DDX11L8A8MPP1 907 aa29.41■■■□□ 2.3
PREB-201ENST00000260643 EIF5BO60841 1220 aaKnown RBP29.41■■■□□ 2.3
PREB-201ENST00000260643 NOB1Q9ULX3 412 aaKnown RBP29.41■■■□□ 2.3
PREB-201ENST00000260643 NEXMIFQ5QGS0 1516 aa29.41■■■□□ 2.3
PREB-201ENST00000260643 NUCB1Q02818 461 aa29.4■■■□□ 2.3
PREB-201ENST00000260643 SPRYD3Q8NCJ5 442 aa29.4■■■□□ 2.3
PREB-201ENST00000260643 A0A1W2PP64 1363 aa29.4■■■□□ 2.3
PREB-201ENST00000260643 VGFO15240 615 aaPredicted RBP29.4■■■□□ 2.3
PREB-201ENST00000260643 UBE2Q2Q8WVN8 375 aa29.4■■■□□ 2.3
PREB-201ENST00000260643 CAMSAP1Q5T5Y3 1602 aa29.4■■■□□ 2.3
PREB-201ENST00000260643 ASXL2Q76L83 1435 aa29.39■■■□□ 2.3
PREB-201ENST00000260643 IPO8O15397 1037 aaKnown RBP29.39■■■□□ 2.3
PREB-201ENST00000260643 MRE11P49959 708 aa29.39■■■□□ 2.29
PREB-201ENST00000260643 TMEM57Q8N5G2 664 aa29.39■■■□□ 2.29
PREB-201ENST00000260643 ALDH1L2Q3SY69 923 aa29.38■■■□□ 2.29
PREB-201ENST00000260643 ANKRD26Q9UPS8 1709 aa29.37■■■□□ 2.29
PREB-201ENST00000260643 CABP2Q9NPB3 220 aa29.37■■■□□ 2.29
PREB-201ENST00000260643 BRPF1P55201 1214 aaPredicted RBP29.36■■■□□ 2.29
PREB-201ENST00000260643 CIZ1Q9ULV3 898 aaPredicted RBP29.36■■■□□ 2.29
PREB-201ENST00000260643 ZFYVE9O95405 1425 aa29.36■■■□□ 2.29
PREB-201ENST00000260643 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
PREB-201ENST00000260643 PNPLA6Q8IY17 1366 aa29.35■■■□□ 2.29
PREB-201ENST00000260643 U2SURPO15042 1029 aaKnown RBP29.35■■■□□ 2.29
PREB-201ENST00000260643 CLCN1P35523 988 aa29.34■■■□□ 2.29
PREB-201ENST00000260643 PNNQ9H307 717 aaKnown RBP29.34■■■□□ 2.29
PREB-201ENST00000260643 ZNF428Q96B54 188 aa29.33■■■□□ 2.29
PREB-201ENST00000260643 OSCARQ8IYS5 282 aa29.33■■■□□ 2.29
PREB-201ENST00000260643 GZF1Q9H116 711 aaPredicted RBP29.32■■■□□ 2.28
PREB-201ENST00000260643 CFAP74Q9C0B2 1584 aa29.32■■■□□ 2.28
PREB-201ENST00000260643 PANK2Q9BZ23 570 aa29.32■■■□□ 2.28
PREB-201ENST00000260643 BMP2KLQ5H9B9 411 aa29.31■■■□□ 2.28
PREB-201ENST00000260643 ATAD2Q6PL18 1390 aa29.31■■■□□ 2.28
PREB-201ENST00000260643 CDC42BPGQ6DT37 1551 aa29.31■■■□□ 2.28
PREB-201ENST00000260643 RIPK4P57078 832 aa29.3■■■□□ 2.28
PREB-201ENST00000260643 CHD1LQ86WJ1 897 aa29.3■■■□□ 2.28
PREB-201ENST00000260643 PPIP5K1Q6PFW1 1433 aa29.3■■■□□ 2.28
PREB-201ENST00000260643 SIGLEC1Q9BZZ2 1709 aa29.3■■■□□ 2.28
PREB-201ENST00000260643 GGT6Q6P531 493 aa29.29■■■□□ 2.28
PREB-201ENST00000260643 FYB1O15117 783 aa29.29■■■□□ 2.28
PREB-201ENST00000260643 GGNBP2Q9H3C7 697 aa29.29■■■□□ 2.28
PREB-201ENST00000260643 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
PREB-201ENST00000260643 CLTCQ00610 1675 aaKnown RBP29.28■■■□□ 2.28
PREB-201ENST00000260643 CFAP65Q6ZU64 1925 aaKnown RBP29.27■■■□□ 2.28
PREB-201ENST00000260643 GRPEL1Q9HAV7 217 aa29.26■■■□□ 2.28
PREB-201ENST00000260643 TERF2IPQ9NYB0 399 aa29.26■■■□□ 2.28
PREB-201ENST00000260643 DIAPH1O60610 1272 aaKnown RBP29.26■■■□□ 2.27
PREB-201ENST00000260643 PIK3R4Q99570 1358 aa29.26■■■□□ 2.27
PREB-201ENST00000260643 ARHGAP31Q2M1Z3 1444 aa29.25■■■□□ 2.27
PREB-201ENST00000260643 PTMSP20962 102 aa29.25■■■□□ 2.27
PREB-201ENST00000260643 CHMP4BQ9H444 224 aaKnown RBP29.25■■■□□ 2.27
PREB-201ENST00000260643 RAB3GAP1Q15042 981 aa29.24■■■□□ 2.27
PREB-201ENST00000260643 GCC1Q96CN9 775 aa29.24■■■□□ 2.27
PREB-201ENST00000260643 PTPRMP28827 1452 aa29.24■■■□□ 2.27
PREB-201ENST00000260643 FCHSD2O94868 740 aa29.23■■■□□ 2.27
PREB-201ENST00000260643 LNPKQ9C0E8 428 aa29.23■■■□□ 2.27
PREB-201ENST00000260643 ARHGAP45Q92619 1136 aa29.23■■■□□ 2.27
PREB-201ENST00000260643 TNPO1Q92973 898 aaKnown RBP29.23■■■□□ 2.27
PREB-201ENST00000260643 KIF2CQ99661 725 aa29.23■■■□□ 2.27
PREB-201ENST00000260643 REREQ9P2R6 1566 aa29.22■■■□□ 2.27
PREB-201ENST00000260643 SRPK2P78362 688 aaKnown RBP29.22■■■□□ 2.27
PREB-201ENST00000260643 SKOR2Q2VWA4 1001 aaPredicted RBP29.22■■■□□ 2.27
PREB-201ENST00000260643 GBP4Q96PP9 640 aa29.22■■■□□ 2.27
PREB-201ENST00000260643 ARXQ96QS3 562 aa29.21■■■□□ 2.27
PREB-201ENST00000260643 ZBTB7BO15156 539 aaPredicted RBP29.2■■■□□ 2.26
PREB-201ENST00000260643 PTCH1Q13635 1447 aa29.2■■■□□ 2.26
PREB-201ENST00000260643 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
PREB-201ENST00000260643 LRRC7Q96NW7 1537 aa29.18■■■□□ 2.26
PREB-201ENST00000260643 HSP90AB1P08238 724 aaKnown RBP29.18■■■□□ 2.26
PREB-201ENST00000260643 NUTM2DQ5VT03 806 aaPredicted RBP29.18■■■□□ 2.26
PREB-201ENST00000260643 SAFB2Q14151 953 aaKnown RBP eCLIP29.15■■■□□ 2.26
PREB-201ENST00000260643 CLEC17AQ6ZS10 378 aa29.14■■■□□ 2.26
PREB-201ENST00000260643 MRPL50Q8N5N7 158 aaKnown RBP29.14■■■□□ 2.26
PREB-201ENST00000260643 SLC52A1Q9NWF4 448 aa29.14■■■□□ 2.26
PREB-201ENST00000260643 K7ELQ4 463 aaPredicted RBP29.12■■■□□ 2.25
PREB-201ENST00000260643 VAMP4O75379 141 aa29.12■■■□□ 2.25
PREB-201ENST00000260643 IDI1Q13907 227 aa29.12■■■□□ 2.25
PREB-201ENST00000260643 ANKRD45Q5TZF3 282 aa29.12■■■□□ 2.25
PREB-201ENST00000260643 HDGFL2Q7Z4V5 671 aaPredicted RBP29.12■■■□□ 2.25
PREB-201ENST00000260643 KIF20BQ96Q89 1820 aa29.12■■■□□ 2.25
PREB-201ENST00000260643 CALD1Q05682 793 aaKnown RBP29.11■■■□□ 2.25
PREB-201ENST00000260643 TBC1D9Q6ZT07 1266 aa29.11■■■□□ 2.25
PREB-201ENST00000260643 YTHDC2Q9H6S0 1430 aaKnown RBP29.1■■■□□ 2.25
PREB-201ENST00000260643 ABCC4O15439 1325 aa29.1■■■□□ 2.25
PREB-201ENST00000260643 ESPNB1AK53 854 aa29.1■■■□□ 2.25
PREB-201ENST00000260643 ARHGEF40Q8TER5 1519 aa29.1■■■□□ 2.25
PREB-201ENST00000260643 STK26Q9P289 416 aa29.09■■■□□ 2.25
PREB-201ENST00000260643 PRKAR2BP31323 418 aa29.08■■■□□ 2.25
PREB-201ENST00000260643 NFE2L2Q16236 605 aa29.08■■■□□ 2.25
PREB-201ENST00000260643 GAS2L3Q86XJ1 694 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms