RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-201ENST00000258947 PSME1Q06323 249 aa11.29□□□□□ -0.6
CALCOCO2-201ENST00000258947 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
CALCOCO2-201ENST00000258947 XPCQ01831 940 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-201ENST00000258947 ABTB2Q8N961 1025 aa11.29□□□□□ -0.6
CALCOCO2-201ENST00000258947 MYH16Q9H6N6 1097 aa11.29□□□□□ -0.6
CALCOCO2-201ENST00000258947 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 HSPA2P54652 639 aa11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-201ENST00000258947 MYOM1P52179 1685 aa11.27□□□□□ -0.6
CALCOCO2-201ENST00000258947 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-201ENST00000258947 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
CALCOCO2-201ENST00000258947 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
CALCOCO2-201ENST00000258947 TTC21BQ7Z4L5 1316 aa11.27□□□□□ -0.61
CALCOCO2-201ENST00000258947 DMRT2Q9Y5R5 561 aa11.27□□□□□ -0.61
CALCOCO2-201ENST00000258947 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 BCAR3O75815 825 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
CALCOCO2-201ENST00000258947 FAM135BQ49AJ0 1406 aa11.25□□□□□ -0.61
CALCOCO2-201ENST00000258947 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-201ENST00000258947 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
CALCOCO2-201ENST00000258947 TMPOP42166 694 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-201ENST00000258947 SULT6B1Q6IMI4 303 aa11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 FOXO3O43524 673 aa11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
CALCOCO2-201ENST00000258947 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
CALCOCO2-201ENST00000258947 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
CALCOCO2-201ENST00000258947 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
CALCOCO2-201ENST00000258947 FCHSD2O94868 740 aa11.22□□□□□ -0.61
CALCOCO2-201ENST00000258947 HSP90AB2PQ58FF8 381 aa11.22□□□□□ -0.61
CALCOCO2-201ENST00000258947 ATF3P18847 181 aa11.22□□□□□ -0.61
CALCOCO2-201ENST00000258947 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
CALCOCO2-201ENST00000258947 DLC1Q96QB1 1528 aa11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 C3P01024 1663 aa11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 ATP7BP35670 1465 aa11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 COG6Q9Y2V7 657 aa11.21□□□□□ -0.61
CALCOCO2-201ENST00000258947 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.62
CALCOCO2-201ENST00000258947 WDR63Q8IWG1 891 aa11.21□□□□□ -0.62
CALCOCO2-201ENST00000258947 PANK1Q8TE04 598 aa11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 RTF1Q92541 710 aaKnown RBP11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 INSRP06213 1382 aa11.2□□□□□ -0.62
CALCOCO2-201ENST00000258947 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 NPM2Q86SE8 214 aaKnown RBP11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
CALCOCO2-201ENST00000258947 RGS3P49796 1198 aa11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 TECPR2O15040 1411 aa11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 CEP170BQ9Y4F5 1589 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 ZNF521Q96K83 1311 aa11.18□□□□□ -0.62
CALCOCO2-201ENST00000258947 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 FAM83GA6ND36 823 aa11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 MAP3K19Q56UN5 1328 aa11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
CALCOCO2-201ENST00000258947 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 IL13P35225 146 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 ITPRIPQ8IWB1 547 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 NRXN3Q9Y4C0 1643 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 RNF123Q5XPI4 1314 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 USP6P35125 1406 aa11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-201ENST00000258947 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
CALCOCO2-201ENST00000258947 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
CALCOCO2-201ENST00000258947 ARHGAP23Q9P227 1491 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 MCM10Q7L590 875 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 SLIT1O75093 1534 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 GNAI1P63096 354 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 PLEKHF1Q96S99 279 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 CPS1P31327 1500 aa11.14□□□□□ -0.63
CALCOCO2-201ENST00000258947 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
CALCOCO2-201ENST00000258947 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
CALCOCO2-201ENST00000258947 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
CALCOCO2-201ENST00000258947 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms