RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 NGLY1Q96IV0 654 aa26.21■■□□□ 1.79
UPK3B-201ENST00000257632 CABLES1Q8TDN4 633 aa26.2■■□□□ 1.78
UPK3B-201ENST00000257632 MARF1Q9Y4F3 1742 aaKnown RBP26.19■■□□□ 1.78
UPK3B-201ENST00000257632 AFF2P51816 1311 aa26.19■■□□□ 1.78
UPK3B-201ENST00000257632 TMF1P82094 1093 aa26.19■■□□□ 1.78
UPK3B-201ENST00000257632 TMC1Q8TDI8 760 aa26.19■■□□□ 1.78
UPK3B-201ENST00000257632 ABCA3Q99758 1704 aa26.17■■□□□ 1.78
UPK3B-201ENST00000257632 USP6P35125 1406 aa26.17■■□□□ 1.78
UPK3B-201ENST00000257632 PUS7Q96PZ0 661 aaKnown RBP26.17■■□□□ 1.78
UPK3B-201ENST00000257632 BRD4O60885 1362 aaPredicted RBP26.17■■□□□ 1.78
UPK3B-201ENST00000257632 ZNF692Q9BU19 519 aaPredicted RBP26.16■■□□□ 1.78
UPK3B-201ENST00000257632 AKAP12Q02952 1782 aa26.15■■□□□ 1.78
UPK3B-201ENST00000257632 RXRBP28702 533 aa26.15■■□□□ 1.78
UPK3B-201ENST00000257632 EIF4G2P78344 907 aaKnown RBP eCLIP26.15■■□□□ 1.78
UPK3B-201ENST00000257632 ABTB2Q8N961 1025 aa26.15■■□□□ 1.78
UPK3B-201ENST00000257632 NUTM2GQ5VZR2 741 aa26.14■■□□□ 1.78
UPK3B-201ENST00000257632 KTN1Q86UP2 1357 aaKnown RBP26.12■■□□□ 1.77
UPK3B-201ENST00000257632 CDCA8Q53HL2 280 aa26.12■■□□□ 1.77
UPK3B-201ENST00000257632 HDGFL2Q7Z4V5 671 aaPredicted RBP26.11■■□□□ 1.77
UPK3B-201ENST00000257632 SLC12A5Q9H2X9 1139 aa26.11■■□□□ 1.77
UPK3B-201ENST00000257632 CPSF1Q10570 1443 aaKnown RBP26.11■■□□□ 1.77
UPK3B-201ENST00000257632 USP21Q9UK80 565 aa26.1■■□□□ 1.77
UPK3B-201ENST00000257632 NINLQ9Y2I6 1382 aa26.09■■□□□ 1.77
UPK3B-201ENST00000257632 CRYBG1Q9Y4K1 1723 aa26.09■■□□□ 1.77
UPK3B-201ENST00000257632 TERF2IPQ9NYB0 399 aa26.09■■□□□ 1.77
UPK3B-201ENST00000257632 MON2Q7Z3U7 1717 aa26.08■■□□□ 1.77
UPK3B-201ENST00000257632 HSPA5P11021 654 aaKnown RBP26.08■■□□□ 1.77
UPK3B-201ENST00000257632 NLRP13Q86W25 1043 aa26.08■■□□□ 1.77
UPK3B-201ENST00000257632 UPF1Q92900 1129 aaKnown RBP eCLIP26.08■■□□□ 1.77
UPK3B-201ENST00000257632 PHRF1Q9P1Y6 1649 aaKnown RBP26.07■■□□□ 1.76
UPK3B-201ENST00000257632 FNBP4Q8N3X1 1017 aaPredicted RBP26.07■■□□□ 1.76
UPK3B-201ENST00000257632 TTC21BQ7Z4L5 1316 aa26.07■■□□□ 1.76
UPK3B-201ENST00000257632 SSH2Q76I76 1423 aa26.06■■□□□ 1.76
UPK3B-201ENST00000257632 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
UPK3B-201ENST00000257632 CDK12Q9NYV4 1490 aaPredicted RBP26.05■■□□□ 1.76
UPK3B-201ENST00000257632 NRKQ7Z2Y5 1582 aa26.05■■□□□ 1.76
UPK3B-201ENST00000257632 NLRP6P59044 892 aa26.05■■□□□ 1.76
UPK3B-201ENST00000257632 TTC21AQ8NDW8 1320 aa26.05■■□□□ 1.76
UPK3B-201ENST00000257632 QTRT2Q9H974 415 aaKnown RBP26.04■■□□□ 1.76
UPK3B-201ENST00000257632 A0A1W2PP64 1363 aa26.03■■□□□ 1.76
UPK3B-201ENST00000257632 PIK3C2AO00443 1686 aa26.03■■□□□ 1.76
UPK3B-201ENST00000257632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.02■■□□□ 1.76
UPK3B-201ENST00000257632 TRPC5Q9UL62 973 aaPredicted RBP26.02■■□□□ 1.76
UPK3B-201ENST00000257632 PLCH1Q4KWH8 1693 aa26.02■■□□□ 1.76
UPK3B-201ENST00000257632 RGS12O14924 1447 aa26.01■■□□□ 1.75
UPK3B-201ENST00000257632 SLIT2O94813 1529 aa26.01■■□□□ 1.75
UPK3B-201ENST00000257632 USP19O94966 1318 aa26.01■■□□□ 1.75
UPK3B-201ENST00000257632 POLR3GLQ9BT43 218 aa26.01■■□□□ 1.75
UPK3B-201ENST00000257632 PRDM11Q9NQV5 511 aa26.01■■□□□ 1.75
UPK3B-201ENST00000257632 FAM83GA6ND36 823 aa26■■□□□ 1.75
UPK3B-201ENST00000257632 ZC3H6P61129 1189 aaKnown RBP26■■□□□ 1.75
UPK3B-201ENST00000257632 COL14A1Q05707 1796 aaKnown RBP26■■□□□ 1.75
UPK3B-201ENST00000257632 BCL9LQ86UU0 1499 aa25.99■■□□□ 1.75
UPK3B-201ENST00000257632 EDC4Q6P2E9 1401 aaKnown RBP25.99■■□□□ 1.75
UPK3B-201ENST00000257632 UNC5CLQ8IV45 518 aa25.99■■□□□ 1.75
UPK3B-201ENST00000257632 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.99■■□□□ 1.75
UPK3B-201ENST00000257632 NWD2Q9ULI1 1742 aa25.99■■□□□ 1.75
UPK3B-201ENST00000257632 KIAA0232Q92628 1395 aa25.98■■□□□ 1.75
UPK3B-201ENST00000257632 RBM6P78332 1123 aaKnown RBP25.98■■□□□ 1.75
UPK3B-201ENST00000257632 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
UPK3B-201ENST00000257632 GCP02774 474 aa25.97■■□□□ 1.75
UPK3B-201ENST00000257632 ATRNO75882 1429 aa25.97■■□□□ 1.75
UPK3B-201ENST00000257632 BTG4Q9NY30 223 aa25.95■■□□□ 1.74
UPK3B-201ENST00000257632 SLIT3O75094 1523 aa25.94■■□□□ 1.74
UPK3B-201ENST00000257632 CHRNA2Q15822 529 aa25.94■■□□□ 1.74
UPK3B-201ENST00000257632 NME9Q86XW9 330 aa25.94■■□□□ 1.74
UPK3B-201ENST00000257632 MYOM1P52179 1685 aa25.93■■□□□ 1.74
UPK3B-201ENST00000257632 ZBTB7CA1YPR0 619 aa25.93■■□□□ 1.74
UPK3B-201ENST00000257632 KCNH5Q8NCM2 988 aa25.92■■□□□ 1.74
UPK3B-201ENST00000257632 CCDC9Q9Y3X0 531 aaKnown RBP25.92■■□□□ 1.74
UPK3B-201ENST00000257632 SOX12O15370 315 aa25.91■■□□□ 1.74
UPK3B-201ENST00000257632 CPDO75976 1380 aa25.91■■□□□ 1.74
UPK3B-201ENST00000257632 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
UPK3B-201ENST00000257632 NRAPQ86VF7 1730 aa25.9■■□□□ 1.74
UPK3B-201ENST00000257632 USP31Q70CQ4 1352 aa25.9■■□□□ 1.74
UPK3B-201ENST00000257632 GJD4Q96KN9 370 aaPredicted RBP25.89■■□□□ 1.74
UPK3B-201ENST00000257632 VPS72Q15906 364 aa25.88■■□□□ 1.73
UPK3B-201ENST00000257632 USP54Q70EL1 1684 aa25.87■■□□□ 1.73
UPK3B-201ENST00000257632 STRN4Q9NRL3 753 aa25.86■■□□□ 1.73
UPK3B-201ENST00000257632 EVA1CP58658 441 aa25.84■■□□□ 1.73
UPK3B-201ENST00000257632 COG3Q96JB2 828 aa25.84■■□□□ 1.73
UPK3B-201ENST00000257632 GLI3P10071 1580 aa25.83■■□□□ 1.73
UPK3B-201ENST00000257632 OVOS2A0A0J9YW53 1432 aa25.83■■□□□ 1.73
UPK3B-201ENST00000257632 OVOS2Q6IE36 1432 aa25.83■■□□□ 1.73
UPK3B-201ENST00000257632 LMO7Q8WWI1 1683 aa25.83■■□□□ 1.73
UPK3B-201ENST00000257632 NSD3Q9BZ95 1437 aa25.82■■□□□ 1.72
UPK3B-201ENST00000257632 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
UPK3B-201ENST00000257632 NFAT5O94916 1531 aa25.82■■□□□ 1.72
UPK3B-201ENST00000257632 CAMTA1Q9Y6Y1 1673 aa25.81■■□□□ 1.72
UPK3B-201ENST00000257632 KIF20BQ96Q89 1820 aa25.81■■□□□ 1.72
UPK3B-201ENST00000257632 AATKQ6ZMQ8 1374 aa25.81■■□□□ 1.72
UPK3B-201ENST00000257632 ARHGEF25Q86VW2 580 aa25.8■■□□□ 1.72
UPK3B-201ENST00000257632 CARD14Q9BXL6 1004 aa25.79■■□□□ 1.72
UPK3B-201ENST00000257632 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
UPK3B-201ENST00000257632 FYB1O15117 783 aa25.77■■□□□ 1.72
UPK3B-201ENST00000257632 KIF7Q2M1P5 1343 aa25.77■■□□□ 1.72
UPK3B-201ENST00000257632 A0A0G2JS52 829 aa25.76■■□□□ 1.71
UPK3B-201ENST00000257632 MYT1Q01538 1121 aa25.76■■□□□ 1.71
UPK3B-201ENST00000257632 SPATA31A5Q5VU36 1347 aa25.76■■□□□ 1.71
UPK3B-201ENST00000257632 SPATA31A7Q8IWB4 1347 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms