RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZNF521Q96K83 1311 aa18.92■□□□□ 0.62
TRAFD1-201ENST00000257604 PRKAR2BP31323 418 aa18.91■□□□□ 0.62
TRAFD1-201ENST00000257604 POLR3AO14802 1390 aaPredicted RBP18.91■□□□□ 0.62
TRAFD1-201ENST00000257604 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
TRAFD1-201ENST00000257604 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
TRAFD1-201ENST00000257604 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.61
TRAFD1-201ENST00000257604 COG3Q96JB2 828 aa18.88■□□□□ 0.61
TRAFD1-201ENST00000257604 ALKQ9UM73 1620 aa18.88■□□□□ 0.61
TRAFD1-201ENST00000257604 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 EXOSC9Q06265 439 aaKnown RBP18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 PTPRMP28827 1452 aa18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 PDE4AP27815 886 aa18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 POLKQ9UBT6 870 aa18.87■□□□□ 0.61
TRAFD1-201ENST00000257604 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
TRAFD1-201ENST00000257604 NGDNQ8NEJ9 315 aaKnown RBP18.86■□□□□ 0.61
TRAFD1-201ENST00000257604 DCTN1Q14203 1278 aa18.85■□□□□ 0.61
TRAFD1-201ENST00000257604 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
TRAFD1-201ENST00000257604 PPIP5K1Q6PFW1 1433 aa18.85■□□□□ 0.61
TRAFD1-201ENST00000257604 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
TRAFD1-201ENST00000257604 PHACTR3Q96KR7 559 aa18.84■□□□□ 0.61
TRAFD1-201ENST00000257604 ABCC11Q96J66 1382 aa18.83■□□□□ 0.61
TRAFD1-201ENST00000257604 NKTRP30414 1462 aaKnown RBP18.83■□□□□ 0.61
TRAFD1-201ENST00000257604 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.6
TRAFD1-201ENST00000257604 LTV1Q96GA3 475 aaPredicted RBP18.83■□□□□ 0.6
TRAFD1-201ENST00000257604 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
TRAFD1-201ENST00000257604 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
TRAFD1-201ENST00000257604 RLBP1P12271 317 aa18.82■□□□□ 0.6
TRAFD1-201ENST00000257604 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
TRAFD1-201ENST00000257604 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 ZFYVE9O95405 1425 aa18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 TMEM2Q9UHN6 1383 aa18.81■□□□□ 0.6
TRAFD1-201ENST00000257604 ACEP12821 1306 aa18.8■□□□□ 0.6
TRAFD1-201ENST00000257604 ZC3H13Q5T200 1668 aaKnown RBP18.79■□□□□ 0.6
TRAFD1-201ENST00000257604 IGHDP01880 384 aa18.79■□□□□ 0.6
TRAFD1-201ENST00000257604 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
TRAFD1-201ENST00000257604 TRMT2AQ8IZ69 625 aaKnown RBP18.79■□□□□ 0.6
TRAFD1-201ENST00000257604 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
TRAFD1-201ENST00000257604 TRIM35Q9UPQ4 493 aa18.78■□□□□ 0.6
TRAFD1-201ENST00000257604 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
TRAFD1-201ENST00000257604 PUS7Q96PZ0 661 aaKnown RBP18.77■□□□□ 0.6
TRAFD1-201ENST00000257604 BACH2Q9BYV9 841 aa18.77■□□□□ 0.6
TRAFD1-201ENST00000257604 XPCQ01831 940 aaPredicted RBP18.76■□□□□ 0.59
TRAFD1-201ENST00000257604 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
TRAFD1-201ENST00000257604 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
TRAFD1-201ENST00000257604 MYO3AQ8NEV4 1616 aa18.76■□□□□ 0.59
TRAFD1-201ENST00000257604 THEMISQ8N1K5 641 aaPredicted RBP18.75■□□□□ 0.59
TRAFD1-201ENST00000257604 KIF13AQ9H1H9 1805 aa18.75■□□□□ 0.59
TRAFD1-201ENST00000257604 KCNA6P17658 529 aa18.75■□□□□ 0.59
TRAFD1-201ENST00000257604 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
TRAFD1-201ENST00000257604 SSH1Q8WYL5 1049 aa18.74■□□□□ 0.59
TRAFD1-201ENST00000257604 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
TRAFD1-201ENST00000257604 NSD2O96028 1365 aa18.74■□□□□ 0.59
TRAFD1-201ENST00000257604 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
TRAFD1-201ENST00000257604 CD163L1Q9NR16 1453 aa18.74■□□□□ 0.59
TRAFD1-201ENST00000257604 CENPQQ7L2Z9 268 aaPredicted RBP18.73■□□□□ 0.59
TRAFD1-201ENST00000257604 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
TRAFD1-201ENST00000257604 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
TRAFD1-201ENST00000257604 AGLP35573 1532 aa18.72■□□□□ 0.59
TRAFD1-201ENST00000257604 NLRP6P59044 892 aa18.72■□□□□ 0.59
TRAFD1-201ENST00000257604 ARXQ96QS3 562 aa18.71■□□□□ 0.59
TRAFD1-201ENST00000257604 INSRP06213 1382 aa18.71■□□□□ 0.59
TRAFD1-201ENST00000257604 AMPHP49418 695 aa18.71■□□□□ 0.59
TRAFD1-201ENST00000257604 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
TRAFD1-201ENST00000257604 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
TRAFD1-201ENST00000257604 MCM10Q7L590 875 aa18.7■□□□□ 0.58
TRAFD1-201ENST00000257604 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
TRAFD1-201ENST00000257604 FCHSD2O94868 740 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 ZKSCAN2Q63HK3 967 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
TRAFD1-201ENST00000257604 DZIP1LQ8IYY4 767 aaKnown RBP18.68■□□□□ 0.58
TRAFD1-201ENST00000257604 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
TRAFD1-201ENST00000257604 C1orf115Q9H7X2 142 aa18.68■□□□□ 0.58
TRAFD1-201ENST00000257604 PNNQ9H307 717 aaKnown RBP18.67■□□□□ 0.58
TRAFD1-201ENST00000257604 ZNF692Q9BU19 519 aaPredicted RBP18.67■□□□□ 0.58
TRAFD1-201ENST00000257604 ABTB2Q8N961 1025 aa18.67■□□□□ 0.58
TRAFD1-201ENST00000257604 IL13P35225 146 aa18.66■□□□□ 0.58
TRAFD1-201ENST00000257604 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
TRAFD1-201ENST00000257604 FOXO3O43524 673 aa18.66■□□□□ 0.58
TRAFD1-201ENST00000257604 TRIM27P14373 513 aa18.66■□□□□ 0.58
TRAFD1-201ENST00000257604 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
TRAFD1-201ENST00000257604 PDE3AQ14432 1141 aa18.65■□□□□ 0.58
TRAFD1-201ENST00000257604 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
TRAFD1-201ENST00000257604 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
TRAFD1-201ENST00000257604 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
TRAFD1-201ENST00000257604 TMEM57Q8N5G2 664 aa18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 ADAMTS13Q76LX8 1427 aa18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 CPS1P31327 1500 aa18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
TRAFD1-201ENST00000257604 MS4A1P11836 297 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms