RNA–Protein interactions for RNA: ENST00000256722.9

CMPK2-201, Transcript of cytidine/uridine monophosphate kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CMPK2, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK2-201ENST00000256722 PCDHB15Q9Y5E8 787 aa23.26■■□□□ 1.31
CMPK2-201ENST00000256722 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
CMPK2-201ENST00000256722 ALKQ9UM73 1620 aa23.25■■□□□ 1.31
CMPK2-201ENST00000256722 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
CMPK2-201ENST00000256722 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
CMPK2-201ENST00000256722 RIMS2Q9UQ26 1411 aa23.25■■□□□ 1.31
CMPK2-201ENST00000256722 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
CMPK2-201ENST00000256722 USP35Q9P2H5 1018 aa23.24■■□□□ 1.31
CMPK2-201ENST00000256722 METP08581 1390 aa23.24■■□□□ 1.31
CMPK2-201ENST00000256722 CD163L1Q9NR16 1453 aa23.24■■□□□ 1.31
CMPK2-201ENST00000256722 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
CMPK2-201ENST00000256722 C8orf34Q49A92 452 aa23.24■■□□□ 1.31
CMPK2-201ENST00000256722 ZFYVE9O95405 1425 aa23.24■■□□□ 1.31
CMPK2-201ENST00000256722 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
CMPK2-201ENST00000256722 PUS7Q96PZ0 661 aaKnown RBP23.23■■□□□ 1.31
CMPK2-201ENST00000256722 PDE3AQ14432 1141 aa23.23■■□□□ 1.31
CMPK2-201ENST00000256722 MYH16Q9H6N6 1097 aa23.23■■□□□ 1.31
CMPK2-201ENST00000256722 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
CMPK2-201ENST00000256722 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
CMPK2-201ENST00000256722 ELL2O00472 640 aaPredicted RBP23.22■■□□□ 1.31
CMPK2-201ENST00000256722 NGEFQ8N5V2 710 aa23.22■■□□□ 1.31
CMPK2-201ENST00000256722 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
CMPK2-201ENST00000256722 POLKQ9UBT6 870 aa23.22■■□□□ 1.31
CMPK2-201ENST00000256722 IQSEC2Q5JU85 1478 aa23.21■■□□□ 1.31
CMPK2-201ENST00000256722 PHACTR3Q96KR7 559 aa23.21■■□□□ 1.31
CMPK2-201ENST00000256722 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.31
CMPK2-201ENST00000256722 FAM161AQ3B820 660 aa23.2■■□□□ 1.3
CMPK2-201ENST00000256722 FTSJ3Q8IY81 847 aaKnown RBP23.2■■□□□ 1.3
CMPK2-201ENST00000256722 NSD2O96028 1365 aa23.19■■□□□ 1.3
CMPK2-201ENST00000256722 ZMYM3Q14202 1370 aa23.19■■□□□ 1.3
CMPK2-201ENST00000256722 SSH1Q8WYL5 1049 aa23.19■■□□□ 1.3
CMPK2-201ENST00000256722 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
CMPK2-201ENST00000256722 SEC24BO95487 1268 aa23.17■■□□□ 1.3
CMPK2-201ENST00000256722 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
CMPK2-201ENST00000256722 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
CMPK2-201ENST00000256722 CCDC27Q2M243 656 aa23.16■■□□□ 1.3
CMPK2-201ENST00000256722 ARHGEF40Q8TER5 1519 aa23.16■■□□□ 1.3
CMPK2-201ENST00000256722 ITPRIPQ8IWB1 547 aa23.15■■□□□ 1.3
CMPK2-201ENST00000256722 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
CMPK2-201ENST00000256722 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.14■■□□□ 1.29
CMPK2-201ENST00000256722 ZKSCAN2Q63HK3 967 aa23.13■■□□□ 1.29
CMPK2-201ENST00000256722 NLRP1Q9C000 1473 aa23.12■■□□□ 1.29
CMPK2-201ENST00000256722 TRIM27P14373 513 aa23.12■■□□□ 1.29
CMPK2-201ENST00000256722 DCTN1Q14203 1278 aa23.12■■□□□ 1.29
CMPK2-201ENST00000256722 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
CMPK2-201ENST00000256722 FAM83GA6ND36 823 aa23.11■■□□□ 1.29
CMPK2-201ENST00000256722 PPIP5K1Q6PFW1 1433 aa23.11■■□□□ 1.29
CMPK2-201ENST00000256722 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
CMPK2-201ENST00000256722 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
CMPK2-201ENST00000256722 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
CMPK2-201ENST00000256722 DAXXQ9UER7 740 aaPredicted RBP23.1■■□□□ 1.29
CMPK2-201ENST00000256722 LTKP29376 864 aa23.09■■□□□ 1.29
CMPK2-201ENST00000256722 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
CMPK2-201ENST00000256722 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
CMPK2-201ENST00000256722 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.29
CMPK2-201ENST00000256722 COL3A1P02461 1466 aaPredicted RBP23.07■■□□□ 1.28
CMPK2-201ENST00000256722 TSPYL6Q8N831 410 aa23.07■■□□□ 1.28
CMPK2-201ENST00000256722 PRR36Q9H6K5 1346 aa23.07■■□□□ 1.28
CMPK2-201ENST00000256722 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
CMPK2-201ENST00000256722 COG3Q96JB2 828 aa23.07■■□□□ 1.28
CMPK2-201ENST00000256722 CCDC61Q9Y6R9 512 aa23.07■■□□□ 1.28
CMPK2-201ENST00000256722 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
CMPK2-201ENST00000256722 BRPF3Q9ULD4 1205 aa23.06■■□□□ 1.28
CMPK2-201ENST00000256722 FCHSD2O94868 740 aa23.05■■□□□ 1.28
CMPK2-201ENST00000256722 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
CMPK2-201ENST00000256722 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
CMPK2-201ENST00000256722 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
CMPK2-201ENST00000256722 GSE1Q14687 1217 aa23.03■■□□□ 1.28
CMPK2-201ENST00000256722 ATF7IPQ6VMQ6 1270 aa23.03■■□□□ 1.28
CMPK2-201ENST00000256722 C1orf115Q9H7X2 142 aa23.03■■□□□ 1.28
CMPK2-201ENST00000256722 TNRQ92752 1358 aa23.02■■□□□ 1.28
CMPK2-201ENST00000256722 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
CMPK2-201ENST00000256722 IL13P35225 146 aa23.01■■□□□ 1.27
CMPK2-201ENST00000256722 RWDD1Q9H446 243 aaPredicted RBP23.01■■□□□ 1.27
CMPK2-201ENST00000256722 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
CMPK2-201ENST00000256722 NFKBIBQ15653 356 aa23■■□□□ 1.27
CMPK2-201ENST00000256722 PLEKHG5O94827 1062 aa23■■□□□ 1.27
CMPK2-201ENST00000256722 RBM33Q96EV2 1170 aaKnown RBP23■■□□□ 1.27
CMPK2-201ENST00000256722 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
CMPK2-201ENST00000256722 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
CMPK2-201ENST00000256722 CPS1P31327 1500 aa22.98■■□□□ 1.27
CMPK2-201ENST00000256722 AGLP35573 1532 aa22.98■■□□□ 1.27
CMPK2-201ENST00000256722 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
CMPK2-201ENST00000256722 NUTM2GQ5VZR2 741 aa22.98■■□□□ 1.27
CMPK2-201ENST00000256722 ACEP12821 1306 aa22.97■■□□□ 1.27
CMPK2-201ENST00000256722 LRRC7Q96NW7 1537 aa22.97■■□□□ 1.27
CMPK2-201ENST00000256722 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
CMPK2-201ENST00000256722 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
CMPK2-201ENST00000256722 PNNQ9H307 717 aaKnown RBP22.96■■□□□ 1.27
CMPK2-201ENST00000256722 MBIPQ9NS73 344 aa22.96■■□□□ 1.27
CMPK2-201ENST00000256722 ADGRB2O60241 1585 aa22.96■■□□□ 1.27
CMPK2-201ENST00000256722 USP19O94966 1318 aa22.95■■□□□ 1.27
CMPK2-201ENST00000256722 HSP90AB2PQ58FF8 381 aa22.95■■□□□ 1.27
CMPK2-201ENST00000256722 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
CMPK2-201ENST00000256722 MAP2P11137 1827 aaKnown RBP22.95■■□□□ 1.26
CMPK2-201ENST00000256722 C8orf58Q8NAV2 365 aa22.95■■□□□ 1.26
CMPK2-201ENST00000256722 SPRYD3Q8NCJ5 442 aa22.95■■□□□ 1.26
CMPK2-201ENST00000256722 CPSF1Q10570 1443 aaKnown RBP22.93■■□□□ 1.26
CMPK2-201ENST00000256722 MCM10Q7L590 875 aa22.93■■□□□ 1.26
CMPK2-201ENST00000256722 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms