RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TPRNQ4KMQ1 711 aa16.94■□□□□ 0.3
VHL-201ENST00000256474 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
VHL-201ENST00000256474 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
VHL-201ENST00000256474 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
VHL-201ENST00000256474 MCM4P33991 863 aa16.93■□□□□ 0.3
VHL-201ENST00000256474 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
VHL-201ENST00000256474 CEP152O94986 1710 aa16.93■□□□□ 0.3
VHL-201ENST00000256474 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 TRAK2O60296 914 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 PLEKHF1Q96S99 279 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
VHL-201ENST00000256474 CHMP5Q9NZZ3 219 aa16.92■□□□□ 0.3
VHL-201ENST00000256474 MYOM2P54296 1465 aa16.91■□□□□ 0.3
VHL-201ENST00000256474 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
VHL-201ENST00000256474 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
VHL-201ENST00000256474 SHROOM2Q13796 1616 aa16.9■□□□□ 0.3
VHL-201ENST00000256474 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
VHL-201ENST00000256474 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
VHL-201ENST00000256474 ZBTB40Q9NUA8 1239 aa16.9■□□□□ 0.3
VHL-201ENST00000256474 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
VHL-201ENST00000256474 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
VHL-201ENST00000256474 UHRF1BP1LA0JNW5 1464 aa16.89■□□□□ 0.3
VHL-201ENST00000256474 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 POLKQ9UBT6 870 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 KIF1BO60333 1816 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
VHL-201ENST00000256474 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
VHL-201ENST00000256474 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
VHL-201ENST00000256474 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
VHL-201ENST00000256474 MROH2AA6NES4 1674 aa16.88■□□□□ 0.29
VHL-201ENST00000256474 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
VHL-201ENST00000256474 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
VHL-201ENST00000256474 PPRC1Q5VV67 1664 aaKnown RBP16.88■□□□□ 0.29
VHL-201ENST00000256474 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
VHL-201ENST00000256474 C16orf71Q8IYS4 520 aaPredicted RBP16.86■□□□□ 0.29
VHL-201ENST00000256474 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
VHL-201ENST00000256474 MBIPQ9NS73 344 aa16.86■□□□□ 0.29
VHL-201ENST00000256474 SLC52A1Q9NWF4 448 aa16.86■□□□□ 0.29
VHL-201ENST00000256474 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
VHL-201ENST00000256474 AAMPQ13685 434 aa16.85■□□□□ 0.29
VHL-201ENST00000256474 SMARCA5O60264 1052 aaPredicted RBP16.85■□□□□ 0.29
VHL-201ENST00000256474 XRCC6P12956 609 aaKnown RBP eCLIP16.85■□□□□ 0.29
VHL-201ENST00000256474 FCHSD2O94868 740 aa16.85■□□□□ 0.29
VHL-201ENST00000256474 MCM10Q7L590 875 aa16.85■□□□□ 0.29
VHL-201ENST00000256474 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
VHL-201ENST00000256474 COG3Q96JB2 828 aa16.85■□□□□ 0.29
VHL-201ENST00000256474 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
VHL-201ENST00000256474 NFE2L2Q16236 605 aa16.84■□□□□ 0.29
VHL-201ENST00000256474 NUCB1Q02818 461 aa16.84■□□□□ 0.29
VHL-201ENST00000256474 RRAGDQ9NQL2 400 aaPredicted RBP16.84■□□□□ 0.29
VHL-201ENST00000256474 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.29
VHL-201ENST00000256474 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
VHL-201ENST00000256474 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
VHL-201ENST00000256474 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
VHL-201ENST00000256474 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
VHL-201ENST00000256474 VAMP4O75379 141 aa16.83■□□□□ 0.28
VHL-201ENST00000256474 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
VHL-201ENST00000256474 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
VHL-201ENST00000256474 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
VHL-201ENST00000256474 INO80Q9ULG1 1556 aaPredicted RBP16.82■□□□□ 0.28
VHL-201ENST00000256474 GNAI1P63096 354 aa16.82■□□□□ 0.28
VHL-201ENST00000256474 ABCC11Q96J66 1382 aa16.82■□□□□ 0.28
VHL-201ENST00000256474 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
VHL-201ENST00000256474 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
VHL-201ENST00000256474 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
VHL-201ENST00000256474 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
VHL-201ENST00000256474 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
VHL-201ENST00000256474 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
VHL-201ENST00000256474 OTUD7AQ8TE49 926 aaPredicted RBP16.81■□□□□ 0.28
VHL-201ENST00000256474 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
VHL-201ENST00000256474 ZBTB7BO15156 539 aaPredicted RBP16.8■□□□□ 0.28
VHL-201ENST00000256474 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
VHL-201ENST00000256474 POGZQ7Z3K3 1410 aa16.8■□□□□ 0.28
VHL-201ENST00000256474 NSD2O96028 1365 aa16.8■□□□□ 0.28
VHL-201ENST00000256474 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
VHL-201ENST00000256474 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
VHL-201ENST00000256474 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
VHL-201ENST00000256474 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
VHL-201ENST00000256474 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
VHL-201ENST00000256474 ADGRB3O60242 1522 aa16.79■□□□□ 0.28
VHL-201ENST00000256474 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
VHL-201ENST00000256474 SSFA2P28290 1259 aa16.78■□□□□ 0.28
VHL-201ENST00000256474 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
VHL-201ENST00000256474 NLRP1Q9C000 1473 aa16.78■□□□□ 0.28
VHL-201ENST00000256474 F6X3S4 739 aa16.78■□□□□ 0.28
VHL-201ENST00000256474 FAM43AQ8N2R8 423 aa16.78■□□□□ 0.28
VHL-201ENST00000256474 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
VHL-201ENST00000256474 ADGRB1O14514 1584 aa16.77■□□□□ 0.28
VHL-201ENST00000256474 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.27
VHL-201ENST00000256474 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
VHL-201ENST00000256474 DEPDC5O75140 1603 aa16.77■□□□□ 0.27
VHL-201ENST00000256474 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
VHL-201ENST00000256474 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
VHL-201ENST00000256474 ALDH1L2Q3SY69 923 aa16.76■□□□□ 0.27
VHL-201ENST00000256474 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
VHL-201ENST00000256474 GLI2P10070 1586 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms