RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 USP32Q8NFA0 1604 aa14.43□□□□□ -0.1
PDE6B-201ENST00000255622 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
PDE6B-201ENST00000255622 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
PDE6B-201ENST00000255622 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
PDE6B-201ENST00000255622 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
PDE6B-201ENST00000255622 CFAP53Q96M91 514 aa14.42□□□□□ -0.1
PDE6B-201ENST00000255622 GGNBP2Q9H3C7 697 aa14.42□□□□□ -0.1
PDE6B-201ENST00000255622 ZHX1Q9UKY1 873 aaPredicted RBP14.42□□□□□ -0.1
PDE6B-201ENST00000255622 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
PDE6B-201ENST00000255622 MYO5BQ9ULV0 1848 aa14.42□□□□□ -0.1
PDE6B-201ENST00000255622 A0A1W2PP64 1363 aa14.41□□□□□ -0.1
PDE6B-201ENST00000255622 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
PDE6B-201ENST00000255622 CALD1Q05682 793 aaKnown RBP14.4□□□□□ -0.1
PDE6B-201ENST00000255622 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
PDE6B-201ENST00000255622 RRAGDQ9NQL2 400 aaPredicted RBP14.39□□□□□ -0.11
PDE6B-201ENST00000255622 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
PDE6B-201ENST00000255622 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
PDE6B-201ENST00000255622 SEC24BO95487 1268 aa14.39□□□□□ -0.11
PDE6B-201ENST00000255622 WDR63Q8IWG1 891 aa14.39□□□□□ -0.11
PDE6B-201ENST00000255622 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
PDE6B-201ENST00000255622 NEO1Q92859 1461 aa14.38□□□□□ -0.11
PDE6B-201ENST00000255622 FBXO31Q5XUX0 539 aaPredicted RBP14.38□□□□□ -0.11
PDE6B-201ENST00000255622 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
PDE6B-201ENST00000255622 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
PDE6B-201ENST00000255622 RICTORQ6R327 1708 aa14.37□□□□□ -0.11
PDE6B-201ENST00000255622 FTSJ3Q8IY81 847 aaKnown RBP14.37□□□□□ -0.11
PDE6B-201ENST00000255622 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
PDE6B-201ENST00000255622 ABCC11Q96J66 1382 aa14.36□□□□□ -0.11
PDE6B-201ENST00000255622 NSD2O96028 1365 aa14.35□□□□□ -0.11
PDE6B-201ENST00000255622 USP19O94966 1318 aa14.35□□□□□ -0.11
PDE6B-201ENST00000255622 NFKBIBQ15653 356 aa14.35□□□□□ -0.11
PDE6B-201ENST00000255622 PTPRMP28827 1452 aa14.35□□□□□ -0.11
PDE6B-201ENST00000255622 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 POGKQ9P215 609 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 FYB1O15117 783 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
PDE6B-201ENST00000255622 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 MYH16Q9H6N6 1097 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 TMEM131LA2VDJ0 1609 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 ADGRB2O60241 1585 aa14.34□□□□□ -0.11
PDE6B-201ENST00000255622 VIRMAQ69YN4 1812 aaKnown RBP14.34□□□□□ -0.11
PDE6B-201ENST00000255622 FBLN1P23142 703 aa14.33□□□□□ -0.11
PDE6B-201ENST00000255622 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.11
PDE6B-201ENST00000255622 PREX1Q8TCU6 1659 aa14.33□□□□□ -0.11
PDE6B-201ENST00000255622 CD163L1Q9NR16 1453 aa14.33□□□□□ -0.12
PDE6B-201ENST00000255622 ARID3AQ99856 593 aa14.33□□□□□ -0.12
PDE6B-201ENST00000255622 ZNF830Q96NB3 372 aaPredicted RBP14.33□□□□□ -0.12
PDE6B-201ENST00000255622 EXOSC9Q06265 439 aaKnown RBP14.32□□□□□ -0.12
PDE6B-201ENST00000255622 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
PDE6B-201ENST00000255622 TRIM35Q9UPQ4 493 aa14.32□□□□□ -0.12
PDE6B-201ENST00000255622 MAPK8IP3Q9UPT6 1336 aa14.32□□□□□ -0.12
PDE6B-201ENST00000255622 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
PDE6B-201ENST00000255622 COL3A1P02461 1466 aaPredicted RBP14.32□□□□□ -0.12
PDE6B-201ENST00000255622 TMPOP42166 694 aaKnown RBP14.32□□□□□ -0.12
PDE6B-201ENST00000255622 PDZRN3Q9UPQ7 1066 aa14.31□□□□□ -0.12
PDE6B-201ENST00000255622 ZFYVE9O95405 1425 aa14.31□□□□□ -0.12
PDE6B-201ENST00000255622 PMFBP1Q8TBY8 1022 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 CABP1Q9NZU7 370 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 CDK19Q9BWU1 502 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
PDE6B-201ENST00000255622 CNPY4Q8N129 248 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 TERF2IPQ9NYB0 399 aa14.3□□□□□ -0.12
PDE6B-201ENST00000255622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDE6B-201ENST00000255622 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
PDE6B-201ENST00000255622 ATAD2Q6PL18 1390 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 DZIP1LQ8IYY4 767 aaKnown RBP14.28□□□□□ -0.12
PDE6B-201ENST00000255622 SSH1Q8WYL5 1049 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 STAG3Q9UJ98 1225 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 FRAT2O75474 233 aaPredicted RBP14.28□□□□□ -0.12
PDE6B-201ENST00000255622 TRIM27P14373 513 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDE6B-201ENST00000255622 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 RIPK4P57078 832 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
PDE6B-201ENST00000255622 ALKQ9UM73 1620 aa14.27□□□□□ -0.12
PDE6B-201ENST00000255622 PDCL3Q9H2J4 239 aa14.27□□□□□ -0.13
PDE6B-201ENST00000255622 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
PDE6B-201ENST00000255622 RWDD1Q9H446 243 aaPredicted RBP14.26□□□□□ -0.13
PDE6B-201ENST00000255622 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
PDE6B-201ENST00000255622 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
PDE6B-201ENST00000255622 NOB1Q9ULX3 412 aaKnown RBP14.26□□□□□ -0.13
PDE6B-201ENST00000255622 ANKRD26Q9UPS8 1709 aa14.26□□□□□ -0.13
PDE6B-201ENST00000255622 CLTCQ00610 1675 aaKnown RBP14.25□□□□□ -0.13
PDE6B-201ENST00000255622 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
PDE6B-201ENST00000255622 ARHGEF40Q8TER5 1519 aa14.25□□□□□ -0.13
PDE6B-201ENST00000255622 TEX2Q8IWB9 1127 aa14.24□□□□□ -0.13
PDE6B-201ENST00000255622 MLECQ14165 292 aa14.24□□□□□ -0.13
PDE6B-201ENST00000255622 SLKQ9H2G2 1235 aaPredicted RBP14.23□□□□□ -0.13
PDE6B-201ENST00000255622 HMOX1P09601 288 aa14.23□□□□□ -0.13
PDE6B-201ENST00000255622 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
PDE6B-201ENST00000255622 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
PDE6B-201ENST00000255622 ATF7IPQ6VMQ6 1270 aa14.23□□□□□ -0.13
PDE6B-201ENST00000255622 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
PDE6B-201ENST00000255622 LRRC7Q96NW7 1537 aa14.22□□□□□ -0.13
PDE6B-201ENST00000255622 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
PDE6B-201ENST00000255622 THUMPD2Q9BTF0 503 aaKnown RBP14.22□□□□□ -0.13
PDE6B-201ENST00000255622 PRKAR2BP31323 418 aa14.22□□□□□ -0.13
PDE6B-201ENST00000255622 TSPOAP1O95153 1857 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms