RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
RPA1-201ENST00000254719 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 NEFMP07197 916 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
RPA1-201ENST00000254719 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 PRAM1Q96QH2 718 aa12.02□□□□□ -0.48
RPA1-201ENST00000254719 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
RPA1-201ENST00000254719 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
RPA1-201ENST00000254719 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
RPA1-201ENST00000254719 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 NSD2O96028 1365 aa12□□□□□ -0.49
RPA1-201ENST00000254719 RIMS2Q9UQ26 1411 aa12□□□□□ -0.49
RPA1-201ENST00000254719 PANK1Q8TE04 598 aa12□□□□□ -0.49
RPA1-201ENST00000254719 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 SAFB2Q14151 953 aaKnown RBP eCLIP12□□□□□ -0.49
RPA1-201ENST00000254719 ROBO2Q9HCK4 1378 aa12□□□□□ -0.49
RPA1-201ENST00000254719 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 LRRC37A3O60309 1634 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
RPA1-201ENST00000254719 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
RPA1-201ENST00000254719 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
RPA1-201ENST00000254719 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 RGS12O14924 1447 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 MS4A1P11836 297 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
RPA1-201ENST00000254719 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
RPA1-201ENST00000254719 E9PSI1 815 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.49
RPA1-201ENST00000254719 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 RGPD2P0DJD1 1756 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 SLIT1O75093 1534 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
RPA1-201ENST00000254719 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.5
RPA1-201ENST00000254719 CABP1Q9NZU7 370 aa11.96□□□□□ -0.5
RPA1-201ENST00000254719 STK26Q9P289 416 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 LTKP29376 864 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
RPA1-201ENST00000254719 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
RPA1-201ENST00000254719 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
RPA1-201ENST00000254719 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 WDR63Q8IWG1 891 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 BRPF3Q9ULD4 1205 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 IL13P35225 146 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 ARXQ96QS3 562 aa11.91□□□□□ -0.5
RPA1-201ENST00000254719 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
RPA1-201ENST00000254719 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
RPA1-201ENST00000254719 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
RPA1-201ENST00000254719 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
RPA1-201ENST00000254719 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
RPA1-201ENST00000254719 TMEM2Q9UHN6 1383 aa11.9□□□□□ -0.51
RPA1-201ENST00000254719 FAM208AQ9UK61 1670 aaKnown RBP11.9□□□□□ -0.51
RPA1-201ENST00000254719 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
RPA1-201ENST00000254719 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 TSPYL6Q8N831 410 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 TRIM27P14373 513 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 LTN1O94822 1766 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 AATKQ6ZMQ8 1374 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
RPA1-201ENST00000254719 NME9Q86XW9 330 aa11.88□□□□□ -0.51
RPA1-201ENST00000254719 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
RPA1-201ENST00000254719 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
RPA1-201ENST00000254719 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
RPA1-201ENST00000254719 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
RPA1-201ENST00000254719 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 ANTXR1Q9H6X2 564 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 SIPA1L3O60292 1781 aaPredicted RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
RPA1-201ENST00000254719 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms