RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
RPA1-201ENST00000254719 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 NEFMP07197 916 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
RPA1-201ENST00000254719 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
RPA1-201ENST00000254719 PRAM1Q96QH2 718 aa12.02□□□□□ -0.48
RPA1-201ENST00000254719 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
RPA1-201ENST00000254719 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
RPA1-201ENST00000254719 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
RPA1-201ENST00000254719 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 NSD2O96028 1365 aa12□□□□□ -0.49
RPA1-201ENST00000254719 RIMS2Q9UQ26 1411 aa12□□□□□ -0.49
RPA1-201ENST00000254719 PANK1Q8TE04 598 aa12□□□□□ -0.49
RPA1-201ENST00000254719 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 SAFB2Q14151 953 aaKnown RBP eCLIP12□□□□□ -0.49
RPA1-201ENST00000254719 ROBO2Q9HCK4 1378 aa12□□□□□ -0.49
RPA1-201ENST00000254719 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
RPA1-201ENST00000254719 LRRC37A3O60309 1634 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
RPA1-201ENST00000254719 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
RPA1-201ENST00000254719 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
RPA1-201ENST00000254719 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
RPA1-201ENST00000254719 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 RGS12O14924 1447 aa11.98□□□□□ -0.49
RPA1-201ENST00000254719 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 MS4A1P11836 297 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
RPA1-201ENST00000254719 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
RPA1-201ENST00000254719 E9PSI1 815 aa11.97□□□□□ -0.49
RPA1-201ENST00000254719 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.49
RPA1-201ENST00000254719 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 RGPD2P0DJD1 1756 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 SLIT1O75093 1534 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
RPA1-201ENST00000254719 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
RPA1-201ENST00000254719 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.5
RPA1-201ENST00000254719 CABP1Q9NZU7 370 aa11.96□□□□□ -0.5
RPA1-201ENST00000254719 STK26Q9P289 416 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 EVC2Q86UK5 1308 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 LTKP29376 864 aa11.95□□□□□ -0.5
RPA1-201ENST00000254719 CGNL1Q0VF96 1302 aa11.94□□□□□ -0.5
RPA1-201ENST00000254719 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
RPA1-201ENST00000254719 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
RPA1-201ENST00000254719 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 WDR63Q8IWG1 891 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 BRPF3Q9ULD4 1205 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
RPA1-201ENST00000254719 IL13P35225 146 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
RPA1-201ENST00000254719 ZNF853P0CG23 659 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
RPA1-201ENST00000254719 ARXQ96QS3 562 aa11.91□□□□□ -0.5
RPA1-201ENST00000254719 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
RPA1-201ENST00000254719 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
RPA1-201ENST00000254719 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
RPA1-201ENST00000254719 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
RPA1-201ENST00000254719 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
RPA1-201ENST00000254719 TMEM2Q9UHN6 1383 aa11.9□□□□□ -0.51
RPA1-201ENST00000254719 FAM208AQ9UK61 1670 aaKnown RBP11.9□□□□□ -0.51
RPA1-201ENST00000254719 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
RPA1-201ENST00000254719 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 TSPYL6Q8N831 410 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 TRIM27P14373 513 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 LTN1O94822 1766 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 AATKQ6ZMQ8 1374 aa11.89□□□□□ -0.51
RPA1-201ENST00000254719 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
RPA1-201ENST00000254719 NME9Q86XW9 330 aa11.88□□□□□ -0.51
RPA1-201ENST00000254719 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
RPA1-201ENST00000254719 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
RPA1-201ENST00000254719 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
RPA1-201ENST00000254719 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
RPA1-201ENST00000254719 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 ANTXR1Q9H6X2 564 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
RPA1-201ENST00000254719 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
RPA1-201ENST00000254719 SIPA1L3O60292 1781 aaPredicted RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
RPA1-201ENST00000254719 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
RPA1-201ENST00000254719 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms