RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
LIN28A-201ENST00000254231 ADAMTS2O95450 1211 aa15.22■□□□□ 0.03
LIN28A-201ENST00000254231 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.03
LIN28A-201ENST00000254231 BCAR3O75815 825 aa15.21■□□□□ 0.03
LIN28A-201ENST00000254231 PREX1Q8TCU6 1659 aa15.21■□□□□ 0.02
LIN28A-201ENST00000254231 NEXMIFQ5QGS0 1516 aa15.2■□□□□ 0.02
LIN28A-201ENST00000254231 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
LIN28A-201ENST00000254231 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
LIN28A-201ENST00000254231 PARD3Q8TEW0 1356 aa15.2■□□□□ 0.02
LIN28A-201ENST00000254231 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
LIN28A-201ENST00000254231 TTC21BQ7Z4L5 1316 aa15.2■□□□□ 0.02
LIN28A-201ENST00000254231 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
LIN28A-201ENST00000254231 ALKQ9UM73 1620 aa15.19■□□□□ 0.02
LIN28A-201ENST00000254231 EXOC6Q8TAG9 804 aa15.18■□□□□ 0.02
LIN28A-201ENST00000254231 MCM10Q7L590 875 aa15.18■□□□□ 0.02
LIN28A-201ENST00000254231 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
LIN28A-201ENST00000254231 ABCC11Q96J66 1382 aa15.18■□□□□ 0.02
LIN28A-201ENST00000254231 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
LIN28A-201ENST00000254231 RIMS1Q86UR5 1692 aaKnown RBP15.17■□□□□ 0.02
LIN28A-201ENST00000254231 MYOM2P54296 1465 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 ANKRD36BQ8N2N9 1353 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 UTRNP46939 3433 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
LIN28A-201ENST00000254231 APBB1O00213 710 aa15.15■□□□□ 0.02
LIN28A-201ENST00000254231 NPM2Q86SE8 214 aaKnown RBP15.15■□□□□ 0.02
LIN28A-201ENST00000254231 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
LIN28A-201ENST00000254231 PTPRMP28827 1452 aa15.15■□□□□ 0.02
LIN28A-201ENST00000254231 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
LIN28A-201ENST00000254231 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
LIN28A-201ENST00000254231 TMEM131LA2VDJ0 1609 aa15.14■□□□□ 0.01
LIN28A-201ENST00000254231 AGLP35573 1532 aa15.14■□□□□ 0.01
LIN28A-201ENST00000254231 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
LIN28A-201ENST00000254231 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
LIN28A-201ENST00000254231 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
LIN28A-201ENST00000254231 PLEKHG1Q9ULL1 1385 aa15.13■□□□□ 0.01
LIN28A-201ENST00000254231 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
LIN28A-201ENST00000254231 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
LIN28A-201ENST00000254231 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
LIN28A-201ENST00000254231 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
LIN28A-201ENST00000254231 MAP3K19Q56UN5 1328 aa15.11■□□□□ 0.01
LIN28A-201ENST00000254231 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
LIN28A-201ENST00000254231 COG6Q9Y2V7 657 aa15.11■□□□□ 0.01
LIN28A-201ENST00000254231 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
LIN28A-201ENST00000254231 EXOSC9Q06265 439 aaKnown RBP15.1■□□□□ 0.01
LIN28A-201ENST00000254231 RTF1Q92541 710 aaKnown RBP15.1■□□□□ 0.01
LIN28A-201ENST00000254231 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
LIN28A-201ENST00000254231 EIF4A2Q14240 407 aaKnown RBP15.1■□□□□ 0.01
LIN28A-201ENST00000254231 EIF2S2P20042 333 aaKnown RBP15.09■□□□□ 0.01
LIN28A-201ENST00000254231 RGS3P49796 1198 aa15.09■□□□□ 0.01
LIN28A-201ENST00000254231 CRBNQ96SW2 442 aa15.09■□□□□ 0.01
LIN28A-201ENST00000254231 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
LIN28A-201ENST00000254231 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
LIN28A-201ENST00000254231 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
LIN28A-201ENST00000254231 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0.01
LIN28A-201ENST00000254231 NLRP1Q9C000 1473 aa15.08■□□□□ 0
LIN28A-201ENST00000254231 EVA1CP58658 441 aa15.08■□□□□ 0
LIN28A-201ENST00000254231 NPHP4O75161 1426 aaPredicted RBP15.08■□□□□ 0
LIN28A-201ENST00000254231 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
LIN28A-201ENST00000254231 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
LIN28A-201ENST00000254231 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
LIN28A-201ENST00000254231 FTSJ3Q8IY81 847 aaKnown RBP15.06■□□□□ 0
LIN28A-201ENST00000254231 GCP02774 474 aa15.06■□□□□ 0
LIN28A-201ENST00000254231 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
LIN28A-201ENST00000254231 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
LIN28A-201ENST00000254231 PPLO60437 1756 aa15.05■□□□□ 0
LIN28A-201ENST00000254231 MPRIPQ6WCQ1 1025 aa15.05■□□□□ -0
LIN28A-201ENST00000254231 EYA1Q99502 592 aa15.04■□□□□ -0
LIN28A-201ENST00000254231 SLAIN2Q9P270 581 aa15.04■□□□□ -0
LIN28A-201ENST00000254231 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
LIN28A-201ENST00000254231 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
LIN28A-201ENST00000254231 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
LIN28A-201ENST00000254231 UBAP1LF5GYI3 381 aa15.03■□□□□ -0
LIN28A-201ENST00000254231 ANXA1P04083 346 aa15.03■□□□□ -0
LIN28A-201ENST00000254231 FAM182BQ5T319 152 aa15.03■□□□□ -0
LIN28A-201ENST00000254231 RTL5Q5HYW3 569 aaPredicted RBP15.02■□□□□ -0
LIN28A-201ENST00000254231 DUSP27Q5VZP5 1158 aa15.02■□□□□ -0
LIN28A-201ENST00000254231 CADPS2Q86UW7 1296 aa15.02■□□□□ -0
LIN28A-201ENST00000254231 C3P01024 1663 aa15.02■□□□□ -0
LIN28A-201ENST00000254231 NRXN1Q9ULB1 1477 aa15.02□□□□□ -0.01
LIN28A-201ENST00000254231 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
LIN28A-201ENST00000254231 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
LIN28A-201ENST00000254231 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
LIN28A-201ENST00000254231 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
LIN28A-201ENST00000254231 AXIN2Q9Y2T1 843 aa15.01□□□□□ -0.01
LIN28A-201ENST00000254231 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
LIN28A-201ENST00000254231 SLFN5Q08AF3 891 aa15□□□□□ -0.01
LIN28A-201ENST00000254231 E9PSI1 815 aa15□□□□□ -0.01
LIN28A-201ENST00000254231 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
LIN28A-201ENST00000254231 NBPF4Q96M43 638 aa15□□□□□ -0.01
LIN28A-201ENST00000254231 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
LIN28A-201ENST00000254231 MSH6P52701 1360 aa14.99□□□□□ -0.01
LIN28A-201ENST00000254231 PPP4R2Q9NY27 417 aa14.99□□□□□ -0.01
LIN28A-201ENST00000254231 IL13P35225 146 aa14.98□□□□□ -0.01
LIN28A-201ENST00000254231 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
LIN28A-201ENST00000254231 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
LIN28A-201ENST00000254231 HOXC9P31274 260 aa14.98□□□□□ -0.01
LIN28A-201ENST00000254231 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
LIN28A-201ENST00000254231 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms