RNA–Protein interactions for RNA: ENST00000249363.3

LRRC4-201, Transcript of leucine rich repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC4, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4-201ENST00000249363 RALBP1Q15311 655 aa12.53□□□□□ -0.4
LRRC4-201ENST00000249363 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
LRRC4-201ENST00000249363 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
LRRC4-201ENST00000249363 TMC1Q8TDI8 760 aa12.52□□□□□ -0.4
LRRC4-201ENST00000249363 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
LRRC4-201ENST00000249363 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.41
LRRC4-201ENST00000249363 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
LRRC4-201ENST00000249363 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
LRRC4-201ENST00000249363 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
LRRC4-201ENST00000249363 ACEP12821 1306 aa12.52□□□□□ -0.41
LRRC4-201ENST00000249363 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
LRRC4-201ENST00000249363 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
LRRC4-201ENST00000249363 MYBBP1AQ9BQG0 1328 aaKnown RBP12.51□□□□□ -0.41
LRRC4-201ENST00000249363 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
LRRC4-201ENST00000249363 FYB1O15117 783 aa12.5□□□□□ -0.41
LRRC4-201ENST00000249363 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
LRRC4-201ENST00000249363 PHRF1Q9P1Y6 1649 aaKnown RBP12.5□□□□□ -0.41
LRRC4-201ENST00000249363 USP31Q70CQ4 1352 aa12.49□□□□□ -0.41
LRRC4-201ENST00000249363 PXDNQ92626 1479 aa12.49□□□□□ -0.41
LRRC4-201ENST00000249363 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
LRRC4-201ENST00000249363 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
LRRC4-201ENST00000249363 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
LRRC4-201ENST00000249363 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
LRRC4-201ENST00000249363 MSH6P52701 1360 aa12.48□□□□□ -0.41
LRRC4-201ENST00000249363 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
LRRC4-201ENST00000249363 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
LRRC4-201ENST00000249363 SLIT3O75094 1523 aa12.47□□□□□ -0.41
LRRC4-201ENST00000249363 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
LRRC4-201ENST00000249363 ABCA3Q99758 1704 aa12.46□□□□□ -0.41
LRRC4-201ENST00000249363 PPP2R1AP30153 589 aa12.46□□□□□ -0.41
LRRC4-201ENST00000249363 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.41
LRRC4-201ENST00000249363 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
LRRC4-201ENST00000249363 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.41
LRRC4-201ENST00000249363 NFAT5O94916 1531 aa12.46□□□□□ -0.42
LRRC4-201ENST00000249363 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 INSRP06213 1382 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 LTN1O94822 1766 aa12.45□□□□□ -0.42
LRRC4-201ENST00000249363 AHDC1Q5TGY3 1603 aaPredicted RBP12.44□□□□□ -0.42
LRRC4-201ENST00000249363 PMFBP1Q8TBY8 1022 aa12.44□□□□□ -0.42
LRRC4-201ENST00000249363 NLRP13Q86W25 1043 aa12.44□□□□□ -0.42
LRRC4-201ENST00000249363 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
LRRC4-201ENST00000249363 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
LRRC4-201ENST00000249363 NME9Q86XW9 330 aa12.43□□□□□ -0.42
LRRC4-201ENST00000249363 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
LRRC4-201ENST00000249363 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
LRRC4-201ENST00000249363 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
LRRC4-201ENST00000249363 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
LRRC4-201ENST00000249363 ATF3P18847 181 aa12.41□□□□□ -0.42
LRRC4-201ENST00000249363 COL18A1P39060 1754 aa12.41□□□□□ -0.42
LRRC4-201ENST00000249363 COL22A1Q8NFW1 1626 aaPredicted RBP12.41□□□□□ -0.42
LRRC4-201ENST00000249363 CDK12Q9NYV4 1490 aaPredicted RBP12.41□□□□□ -0.42
LRRC4-201ENST00000249363 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
LRRC4-201ENST00000249363 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
LRRC4-201ENST00000249363 C14orf37Q86TY3 774 aa12.4□□□□□ -0.42
LRRC4-201ENST00000249363 BLMP54132 1417 aaPredicted RBP12.4□□□□□ -0.43
LRRC4-201ENST00000249363 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
LRRC4-201ENST00000249363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRRC4-201ENST00000249363 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
LRRC4-201ENST00000249363 USP19O94966 1318 aa12.39□□□□□ -0.43
LRRC4-201ENST00000249363 SLAIN2Q9P270 581 aa12.39□□□□□ -0.43
LRRC4-201ENST00000249363 COL16A1Q07092 1604 aaPredicted RBP12.38□□□□□ -0.43
LRRC4-201ENST00000249363 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
LRRC4-201ENST00000249363 SOS2Q07890 1332 aaPredicted RBP12.38□□□□□ -0.43
LRRC4-201ENST00000249363 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
LRRC4-201ENST00000249363 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
LRRC4-201ENST00000249363 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
LRRC4-201ENST00000249363 ABCC6O95255 1503 aa12.36□□□□□ -0.43
LRRC4-201ENST00000249363 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
LRRC4-201ENST00000249363 LMO7Q8WWI1 1683 aa12.35□□□□□ -0.43
LRRC4-201ENST00000249363 FOXO3O43524 673 aa12.35□□□□□ -0.43
LRRC4-201ENST00000249363 PHLPP1O60346 1717 aa12.35□□□□□ -0.43
LRRC4-201ENST00000249363 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
LRRC4-201ENST00000249363 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
LRRC4-201ENST00000249363 MTHFSP49914 203 aa12.34□□□□□ -0.43
LRRC4-201ENST00000249363 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
LRRC4-201ENST00000249363 COG3Q96JB2 828 aa12.34□□□□□ -0.43
LRRC4-201ENST00000249363 KIF24Q5T7B8 1368 aa12.34□□□□□ -0.43
LRRC4-201ENST00000249363 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
LRRC4-201ENST00000249363 FBLN1P23142 703 aa12.33□□□□□ -0.44
LRRC4-201ENST00000249363 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
LRRC4-201ENST00000249363 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
LRRC4-201ENST00000249363 PSME1Q06323 249 aa12.33□□□□□ -0.44
LRRC4-201ENST00000249363 RTL1A6NKG5 1358 aa12.31□□□□□ -0.44
LRRC4-201ENST00000249363 EMILIN1Q9Y6C2 1016 aa12.31□□□□□ -0.44
LRRC4-201ENST00000249363 NCAPD2Q15021 1401 aa12.31□□□□□ -0.44
LRRC4-201ENST00000249363 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
LRRC4-201ENST00000249363 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
LRRC4-201ENST00000249363 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
LRRC4-201ENST00000249363 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
LRRC4-201ENST00000249363 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
LRRC4-201ENST00000249363 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
LRRC4-201ENST00000249363 NLRP6P59044 892 aa12.29□□□□□ -0.44
LRRC4-201ENST00000249363 DLG5Q8TDM6 1919 aa12.28□□□□□ -0.44
LRRC4-201ENST00000249363 IL13P35225 146 aa12.28□□□□□ -0.44
LRRC4-201ENST00000249363 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
LRRC4-201ENST00000249363 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms