RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 IKQ13123 557 aaPredicted RBP12.2□□□□□ -0.46
VIL1-201ENST00000248444 BICDL1Q6ZP65 573 aa12.2□□□□□ -0.46
VIL1-201ENST00000248444 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
VIL1-201ENST00000248444 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 CAMSAP2Q08AD1 1489 aa12.19□□□□□ -0.46
VIL1-201ENST00000248444 RALYLQ86SE5 291 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
VIL1-201ENST00000248444 CEP89Q96ST8 783 aa12.19□□□□□ -0.46
VIL1-201ENST00000248444 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
VIL1-201ENST00000248444 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
VIL1-201ENST00000248444 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
VIL1-201ENST00000248444 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
VIL1-201ENST00000248444 GNAI3P08754 354 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 AMOTL2Q9Y2J4 779 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
VIL1-201ENST00000248444 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
VIL1-201ENST00000248444 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
VIL1-201ENST00000248444 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 PHF14O94880 888 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 DENND4BO75064 1496 aaPredicted RBP12.17□□□□□ -0.46
VIL1-201ENST00000248444 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
VIL1-201ENST00000248444 KDM4AO75164 1064 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
VIL1-201ENST00000248444 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
VIL1-201ENST00000248444 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
VIL1-201ENST00000248444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
VIL1-201ENST00000248444 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 PDE4AP27815 886 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 GNL3LQ9NVN8 582 aaKnown RBP12.16□□□□□ -0.46
VIL1-201ENST00000248444 TPM2P07951 284 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
VIL1-201ENST00000248444 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
VIL1-201ENST00000248444 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
VIL1-201ENST00000248444 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
VIL1-201ENST00000248444 FOXO3O43524 673 aa12.15□□□□□ -0.46
VIL1-201ENST00000248444 FANCAO15360 1455 aa12.15□□□□□ -0.46
VIL1-201ENST00000248444 SIL1Q9H173 461 aa12.15□□□□□ -0.46
VIL1-201ENST00000248444 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.47
VIL1-201ENST00000248444 NOB1Q9ULX3 412 aaKnown RBP12.14□□□□□ -0.47
VIL1-201ENST00000248444 GOLGA6L3A6NEY3 463 aa12.14□□□□□ -0.47
VIL1-201ENST00000248444 MPHOSPH8Q99549 860 aa12.14□□□□□ -0.47
VIL1-201ENST00000248444 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
VIL1-201ENST00000248444 GNAI2P04899 355 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 TPM3P06753 285 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 SAFBQ15424 915 aaKnown RBP eCLIP12.13□□□□□ -0.47
VIL1-201ENST00000248444 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
VIL1-201ENST00000248444 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
VIL1-201ENST00000248444 CNKSR2Q8WXI2 1034 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
VIL1-201ENST00000248444 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
VIL1-201ENST00000248444 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
VIL1-201ENST00000248444 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
VIL1-201ENST00000248444 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 STK11IPQ8N1F8 1099 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 IDI1Q13907 227 aa12.12□□□□□ -0.47
VIL1-201ENST00000248444 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 SMC3Q9UQE7 1217 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
VIL1-201ENST00000248444 STARD3NLO95772 234 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 GOLGA6L19H0YKK7 550 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 BECN2A8MW95 431 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
VIL1-201ENST00000248444 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
VIL1-201ENST00000248444 BRMS1Q9HCU9 246 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
VIL1-201ENST00000248444 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
VIL1-201ENST00000248444 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 ZPR1O75312 459 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 BICD2Q8TD16 824 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 DEKP35659 375 aaKnown RBP12.1□□□□□ -0.47
VIL1-201ENST00000248444 CCT4P50991 539 aaKnown RBP12.1□□□□□ -0.47
VIL1-201ENST00000248444 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
VIL1-201ENST00000248444 CDC45O75419 566 aa12.09□□□□□ -0.47
VIL1-201ENST00000248444 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
VIL1-201ENST00000248444 NME9Q86XW9 330 aa12.09□□□□□ -0.47
VIL1-201ENST00000248444 ABCC5O15440 1437 aa12.09□□□□□ -0.47
VIL1-201ENST00000248444 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
VIL1-201ENST00000248444 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.09□□□□□ -0.47
VIL1-201ENST00000248444 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms