RNA–Protein interactions for RNA: ENST00000246646.3

KRT38-201, Transcript of keratin 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT38, Length 2,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT38-201ENST00000246646 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
KRT38-201ENST00000246646 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
KRT38-201ENST00000246646 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
KRT38-201ENST00000246646 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.17
KRT38-201ENST00000246646 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.17
KRT38-201ENST00000246646 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
KRT38-201ENST00000246646 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
KRT38-201ENST00000246646 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
KRT38-201ENST00000246646 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
KRT38-201ENST00000246646 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
KRT38-201ENST00000246646 TOPAZ1Q8N9V7 1692 aa16.07■□□□□ 0.16
KRT38-201ENST00000246646 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
KRT38-201ENST00000246646 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
KRT38-201ENST00000246646 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 ADGRB2O60241 1585 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 KCNA6P17658 529 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 EXOC6Q8TAG9 804 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
KRT38-201ENST00000246646 XRN1Q8IZH2 1706 aaKnown RBP16.06■□□□□ 0.16
KRT38-201ENST00000246646 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
KRT38-201ENST00000246646 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
KRT38-201ENST00000246646 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
KRT38-201ENST00000246646 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
KRT38-201ENST00000246646 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
KRT38-201ENST00000246646 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
KRT38-201ENST00000246646 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
KRT38-201ENST00000246646 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
KRT38-201ENST00000246646 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
KRT38-201ENST00000246646 ACEP12821 1306 aa16.03■□□□□ 0.16
KRT38-201ENST00000246646 DIP2AQ14689 1571 aa16.03■□□□□ 0.16
KRT38-201ENST00000246646 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
KRT38-201ENST00000246646 NRKQ7Z2Y5 1582 aa16.02■□□□□ 0.16
KRT38-201ENST00000246646 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
KRT38-201ENST00000246646 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
KRT38-201ENST00000246646 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
KRT38-201ENST00000246646 MSH5O43196 834 aa16■□□□□ 0.15
KRT38-201ENST00000246646 SOX12O15370 315 aa16■□□□□ 0.15
KRT38-201ENST00000246646 NALCNQ8IZF0 1738 aa15.99■□□□□ 0.15
KRT38-201ENST00000246646 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
KRT38-201ENST00000246646 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
KRT38-201ENST00000246646 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
KRT38-201ENST00000246646 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
KRT38-201ENST00000246646 BCAR3O75815 825 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 HMOX1P09601 288 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 CRBNQ96SW2 442 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
KRT38-201ENST00000246646 COG3Q96JB2 828 aa15.96■□□□□ 0.15
KRT38-201ENST00000246646 USP6P35125 1406 aa15.96■□□□□ 0.14
KRT38-201ENST00000246646 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
KRT38-201ENST00000246646 E9PSI1 815 aa15.95■□□□□ 0.14
KRT38-201ENST00000246646 PEAK1Q9H792 1746 aa15.95■□□□□ 0.14
KRT38-201ENST00000246646 FMN2Q9NZ56 1722 aa15.95■□□□□ 0.14
KRT38-201ENST00000246646 PLEKHG3A1L390 1219 aa15.94■□□□□ 0.14
KRT38-201ENST00000246646 DLG5Q8TDM6 1919 aa15.93■□□□□ 0.14
KRT38-201ENST00000246646 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
KRT38-201ENST00000246646 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
KRT38-201ENST00000246646 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
KRT38-201ENST00000246646 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
KRT38-201ENST00000246646 TSR2Q969E8 191 aaKnown RBP15.93■□□□□ 0.14
KRT38-201ENST00000246646 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
KRT38-201ENST00000246646 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
KRT38-201ENST00000246646 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
KRT38-201ENST00000246646 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
KRT38-201ENST00000246646 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
KRT38-201ENST00000246646 IL13P35225 146 aa15.91■□□□□ 0.14
KRT38-201ENST00000246646 SKAP1Q86WV1 359 aa15.91■□□□□ 0.14
KRT38-201ENST00000246646 OVOS2A0A0J9YW53 1432 aa15.91■□□□□ 0.14
KRT38-201ENST00000246646 OVOS2Q6IE36 1432 aa15.91■□□□□ 0.14
KRT38-201ENST00000246646 BCL2L13Q9BXK5 485 aa15.9■□□□□ 0.14
KRT38-201ENST00000246646 SSH2Q76I76 1423 aa15.9■□□□□ 0.14
KRT38-201ENST00000246646 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
KRT38-201ENST00000246646 MARF1Q9Y4F3 1742 aaKnown RBP15.9■□□□□ 0.14
KRT38-201ENST00000246646 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
KRT38-201ENST00000246646 RIPK4P57078 832 aa15.89■□□□□ 0.13
KRT38-201ENST00000246646 TNNQ9UQP3 1299 aa15.89■□□□□ 0.13
KRT38-201ENST00000246646 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
KRT38-201ENST00000246646 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
KRT38-201ENST00000246646 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
KRT38-201ENST00000246646 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
KRT38-201ENST00000246646 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
KRT38-201ENST00000246646 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
KRT38-201ENST00000246646 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
KRT38-201ENST00000246646 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
KRT38-201ENST00000246646 PIK3R4Q99570 1358 aa15.87■□□□□ 0.13
KRT38-201ENST00000246646 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
KRT38-201ENST00000246646 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
KRT38-201ENST00000246646 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
KRT38-201ENST00000246646 EIF4A2Q14240 407 aaKnown RBP15.85■□□□□ 0.13
KRT38-201ENST00000246646 FCHSD2O94868 740 aa15.85■□□□□ 0.13
KRT38-201ENST00000246646 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
KRT38-201ENST00000246646 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
KRT38-201ENST00000246646 HSPA2P54652 639 aa15.84■□□□□ 0.13
KRT38-201ENST00000246646 RARSP54136 660 aaKnown RBP15.83■□□□□ 0.12
KRT38-201ENST00000246646 XPCQ01831 940 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms