RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 COL17A1Q9UMD9 1497 aaPredicted RBP14.28□□□□□ -0.12
SOX9-201ENST00000245479 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 ASXL2Q76L83 1435 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 TTC37Q6PGP7 1564 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
SOX9-201ENST00000245479 MVPQ14764 893 aaKnown RBP14.27□□□□□ -0.12
SOX9-201ENST00000245479 TSHZ3Q63HK5 1081 aa14.27□□□□□ -0.12
SOX9-201ENST00000245479 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
SOX9-201ENST00000245479 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
SOX9-201ENST00000245479 NGEFQ8N5V2 710 aa14.27□□□□□ -0.13
SOX9-201ENST00000245479 ATF7IPQ6VMQ6 1270 aa14.27□□□□□ -0.13
SOX9-201ENST00000245479 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
SOX9-201ENST00000245479 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
SOX9-201ENST00000245479 F6X3S4 739 aa14.25□□□□□ -0.13
SOX9-201ENST00000245479 NASPP49321 788 aaPredicted RBP14.25□□□□□ -0.13
SOX9-201ENST00000245479 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
SOX9-201ENST00000245479 USHBP1Q8N6Y0 703 aa14.25□□□□□ -0.13
SOX9-201ENST00000245479 DDX19BQ9UMR2 479 aa14.25□□□□□ -0.13
SOX9-201ENST00000245479 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
SOX9-201ENST00000245479 TWISTNBQ3B726 338 aaPredicted RBP14.24□□□□□ -0.13
SOX9-201ENST00000245479 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
SOX9-201ENST00000245479 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
SOX9-201ENST00000245479 RILPL2Q969X0 211 aa14.24□□□□□ -0.13
SOX9-201ENST00000245479 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
SOX9-201ENST00000245479 OS9Q13438 667 aaPredicted RBP14.22□□□□□ -0.13
SOX9-201ENST00000245479 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
SOX9-201ENST00000245479 ABCA8O94911 1581 aa14.22□□□□□ -0.13
SOX9-201ENST00000245479 ZNF330Q9Y3S2 320 aaPredicted RBP14.22□□□□□ -0.13
SOX9-201ENST00000245479 CDC42BPAQ5VT25 1732 aa14.22□□□□□ -0.13
SOX9-201ENST00000245479 FOXO3O43524 673 aa14.22□□□□□ -0.13
SOX9-201ENST00000245479 NUDT16Q96DE0 195 aaKnown RBP14.22□□□□□ -0.13
SOX9-201ENST00000245479 MAP4K4O95819 1239 aaPredicted RBP14.21□□□□□ -0.13
SOX9-201ENST00000245479 XRCC6P12956 609 aaKnown RBP eCLIP14.21□□□□□ -0.13
SOX9-201ENST00000245479 MAP7D2Q96T17 732 aa14.21□□□□□ -0.13
SOX9-201ENST00000245479 NLRP6P59044 892 aa14.21□□□□□ -0.13
SOX9-201ENST00000245479 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.13
SOX9-201ENST00000245479 TBC1D2Q9BYX2 928 aa14.21□□□□□ -0.13
SOX9-201ENST00000245479 CLCN1P35523 988 aa14.21□□□□□ -0.14
SOX9-201ENST00000245479 MPNDQ8N594 471 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 C8orf58Q8NAV2 365 aa14.2□□□□□ -0.14
SOX9-201ENST00000245479 ASXL1Q8IXJ9 1541 aa14.19□□□□□ -0.14
SOX9-201ENST00000245479 FKBP5Q13451 457 aaPredicted RBP14.19□□□□□ -0.14
SOX9-201ENST00000245479 WDR7Q9Y4E6 1490 aa14.19□□□□□ -0.14
SOX9-201ENST00000245479 SHANK2Q9UPX8 1470 aa14.19□□□□□ -0.14
SOX9-201ENST00000245479 TSPYL4Q9UJ04 414 aa14.19□□□□□ -0.14
SOX9-201ENST00000245479 CHMP4BQ9H444 224 aaKnown RBP14.18□□□□□ -0.14
SOX9-201ENST00000245479 A0A1W2PP64 1363 aa14.18□□□□□ -0.14
SOX9-201ENST00000245479 ATP10AO60312 1499 aa14.18□□□□□ -0.14
SOX9-201ENST00000245479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.18□□□□□ -0.14
SOX9-201ENST00000245479 ANXA1P04083 346 aa14.18□□□□□ -0.14
SOX9-201ENST00000245479 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
SOX9-201ENST00000245479 POLKQ9UBT6 870 aa14.18□□□□□ -0.14
SOX9-201ENST00000245479 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
SOX9-201ENST00000245479 PDCL3Q9H2J4 239 aa14.17□□□□□ -0.14
SOX9-201ENST00000245479 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
SOX9-201ENST00000245479 ISY1Q9ULR0 285 aaKnown RBP14.17□□□□□ -0.14
SOX9-201ENST00000245479 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
SOX9-201ENST00000245479 CCDC173Q0VFZ6 552 aa14.17□□□□□ -0.14
SOX9-201ENST00000245479 KDM5DQ9BY66 1539 aa14.16□□□□□ -0.14
SOX9-201ENST00000245479 DDX54Q8TDD1 881 aaKnown RBP14.16□□□□□ -0.14
SOX9-201ENST00000245479 STAC3Q96MF2 364 aa14.16□□□□□ -0.14
SOX9-201ENST00000245479 MBIPQ9NS73 344 aa14.16□□□□□ -0.14
SOX9-201ENST00000245479 CSPP1Q1MSJ5 1256 aa14.16□□□□□ -0.14
SOX9-201ENST00000245479 ABCC2Q92887 1545 aa14.16□□□□□ -0.14
SOX9-201ENST00000245479 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
SOX9-201ENST00000245479 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
SOX9-201ENST00000245479 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
SOX9-201ENST00000245479 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
SOX9-201ENST00000245479 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
SOX9-201ENST00000245479 IL1RAPL2Q9NP60 686 aa14.15□□□□□ -0.14
SOX9-201ENST00000245479 AIMP1Q12904 312 aaKnown RBP14.14□□□□□ -0.15
SOX9-201ENST00000245479 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
SOX9-201ENST00000245479 OTUD7AQ8TE49 926 aaPredicted RBP14.14□□□□□ -0.15
SOX9-201ENST00000245479 GNAI1P63096 354 aa14.14□□□□□ -0.15
SOX9-201ENST00000245479 ZNF521Q96K83 1311 aa14.14□□□□□ -0.15
SOX9-201ENST00000245479 CAVIN1Q6NZI2 390 aaKnown RBP14.14□□□□□ -0.15
SOX9-201ENST00000245479 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
SOX9-201ENST00000245479 DRC7Q8IY82 874 aa14.13□□□□□ -0.15
SOX9-201ENST00000245479 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
SOX9-201ENST00000245479 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
SOX9-201ENST00000245479 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 CCDC61Q9Y6R9 512 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 NFE2L2Q16236 605 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 NPATQ14207 1427 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 ADGBQ8N7X0 1667 aa14.12□□□□□ -0.15
SOX9-201ENST00000245479 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
SOX9-201ENST00000245479 UQCRHP07919 91 aa14.11□□□□□ -0.15
SOX9-201ENST00000245479 CHAMP1Q96JM3 812 aa14.11□□□□□ -0.15
SOX9-201ENST00000245479 NAP1L2Q9ULW6 460 aaPredicted RBP14.11□□□□□ -0.15
SOX9-201ENST00000245479 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
SOX9-201ENST00000245479 CHMP3Q9Y3E7 222 aa14.11□□□□□ -0.15
SOX9-201ENST00000245479 PTPRTO14522 1441 aa14.11□□□□□ -0.15
SOX9-201ENST00000245479 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms