RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 SOX12O15370 315 aa11.87□□□□□ -0.51
IRF1-201ENST00000245414 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
IRF1-201ENST00000245414 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
IRF1-201ENST00000245414 GOLGA6L6A8MZA4 724 aa11.87□□□□□ -0.51
IRF1-201ENST00000245414 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
IRF1-201ENST00000245414 EFCC1Q9HA90 598 aa11.86□□□□□ -0.51
IRF1-201ENST00000245414 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
IRF1-201ENST00000245414 CTNNA3Q9UI47 895 aa11.86□□□□□ -0.51
IRF1-201ENST00000245414 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
IRF1-201ENST00000245414 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 HNRNPH2P55795 449 aaKnown RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 RASSF4Q9H2L5 321 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
IRF1-201ENST00000245414 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 TULP2O00295 520 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 ADCY5O95622 1261 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 ZNF592Q92610 1267 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
IRF1-201ENST00000245414 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
IRF1-201ENST00000245414 C10orf67Q8IYJ2 551 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.517e-6■■□□□ 12.8
IRF1-201ENST00000245414 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
IRF1-201ENST00000245414 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 SRPK2P78362 688 aaKnown RBP11.84□□□□□ -0.51
IRF1-201ENST00000245414 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
IRF1-201ENST00000245414 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
IRF1-201ENST00000245414 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
IRF1-201ENST00000245414 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
IRF1-201ENST00000245414 PKP1Q13835 747 aa11.83□□□□□ -0.52
IRF1-201ENST00000245414 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
IRF1-201ENST00000245414 MBD3O95983 291 aa11.83□□□□□ -0.52
IRF1-201ENST00000245414 NAA30Q147X3 362 aaPredicted RBP11.83□□□□□ -0.52
IRF1-201ENST00000245414 KIAA0586Q9BVV6 1533 aa11.83□□□□□ -0.52
IRF1-201ENST00000245414 POLR1AO95602 1720 aaPredicted RBP11.82□□□□□ -0.52
IRF1-201ENST00000245414 CCDC112Q8NEF3 446 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
IRF1-201ENST00000245414 SCAPERQ9BY12 1400 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 RLBP1P12271 317 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 PSEN1P49768 467 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 C16orf45Q96MC5 204 aaPredicted RBP11.82□□□□□ -0.52
IRF1-201ENST00000245414 MYCBPQ99417 103 aaPredicted RBP11.82□□□□□ -0.52
IRF1-201ENST00000245414 NPHP1O15259 732 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 MMP14P50281 582 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 KIF18AQ8NI77 898 aa11.82□□□□□ -0.52
IRF1-201ENST00000245414 PHF14O94880 888 aa11.81□□□□□ -0.52
IRF1-201ENST00000245414 TNNT1P13805 278 aa11.81□□□□□ -0.52
IRF1-201ENST00000245414 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
IRF1-201ENST00000245414 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
IRF1-201ENST00000245414 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.81□□□□□ -0.52
IRF1-201ENST00000245414 MORC2Q9Y6X9 1032 aaPredicted RBP11.81□□□□□ -0.52
IRF1-201ENST00000245414 V9GYY5 206 aaPredicted RBP11.81□□□□□ -0.52
IRF1-201ENST00000245414 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
IRF1-201ENST00000245414 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
IRF1-201ENST00000245414 RTF1Q92541 710 aaKnown RBP11.8□□□□□ -0.52
IRF1-201ENST00000245414 ST7Q9NRC1 585 aa11.8□□□□□ -0.52
IRF1-201ENST00000245414 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
IRF1-201ENST00000245414 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
IRF1-201ENST00000245414 CEP170Q5SW79 1584 aa11.8□□□□□ -0.52
IRF1-201ENST00000245414 ZMYM3Q14202 1370 aa11.8□□□□□ -0.52
IRF1-201ENST00000245414 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
IRF1-201ENST00000245414 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
IRF1-201ENST00000245414 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 GOLGA6L1Q8N7Z2 621 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
IRF1-201ENST00000245414 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 PYCARDQ9ULZ3 195 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 KIAA0556O60303 1618 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
IRF1-201ENST00000245414 DRC7Q8IY82 874 aa11.79□□□□□ -0.52
IRF1-201ENST00000245414 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 GYS2P54840 703 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 DRC1Q96MC2 740 aa11.78□□□□□ -0.52
IRF1-201ENST00000245414 ICE2Q659A1 982 aa11.77□□□□□ -0.52
IRF1-201ENST00000245414 CTR9Q6PD62 1173 aa11.77□□□□□ -0.52
IRF1-201ENST00000245414 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
IRF1-201ENST00000245414 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
IRF1-201ENST00000245414 POLR3GO15318 223 aaPredicted RBP11.77□□□□□ -0.53
IRF1-201ENST00000245414 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
IRF1-201ENST00000245414 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.53
IRF1-201ENST00000245414 NEK11Q8NG66 645 aa11.77□□□□□ -0.53
IRF1-201ENST00000245414 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms