RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
COL21A1-201ENST00000244728 RAPGEF4Q8WZA2 1011 aa11.32□□□□□ -0.6
COL21A1-201ENST00000244728 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
COL21A1-201ENST00000244728 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
COL21A1-201ENST00000244728 DCTN1Q14203 1278 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 PROSER2Q86WR7 435 aaPredicted RBP11.31□□□□□ -0.6
COL21A1-201ENST00000244728 MIS18AQ9NYP9 233 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 ATF3P18847 181 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
COL21A1-201ENST00000244728 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
COL21A1-201ENST00000244728 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
COL21A1-201ENST00000244728 REC8O95072 547 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
COL21A1-201ENST00000244728 PRPF40AO75400 957 aaKnown RBP11.3□□□□□ -0.6
COL21A1-201ENST00000244728 PHF14O94880 888 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 TNNQ9UQP3 1299 aa11.3□□□□□ -0.6
COL21A1-201ENST00000244728 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
COL21A1-201ENST00000244728 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
COL21A1-201ENST00000244728 INTS3Q68E01 1043 aaKnown RBP11.29□□□□□ -0.6
COL21A1-201ENST00000244728 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
COL21A1-201ENST00000244728 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
COL21A1-201ENST00000244728 CLCN1P35523 988 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
COL21A1-201ENST00000244728 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 NUP153P49790 1475 aaKnown RBP11.28□□□□□ -0.6
COL21A1-201ENST00000244728 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 DIAPH3Q9NSV4 1193 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 NME9Q86XW9 330 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 THEMISQ8N1K5 641 aaPredicted RBP11.28□□□□□ -0.6
COL21A1-201ENST00000244728 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
COL21A1-201ENST00000244728 KIF14Q15058 1648 aa11.27□□□□□ -0.6
COL21A1-201ENST00000244728 TMPOP42166 694 aaKnown RBP11.27□□□□□ -0.61
COL21A1-201ENST00000244728 EMILIN1Q9Y6C2 1016 aa11.27□□□□□ -0.61
COL21A1-201ENST00000244728 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.61
COL21A1-201ENST00000244728 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
COL21A1-201ENST00000244728 RLBP1P12271 317 aa11.27□□□□□ -0.61
COL21A1-201ENST00000244728 RABEP1Q15276 862 aa11.27□□□□□ -0.61
COL21A1-201ENST00000244728 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
COL21A1-201ENST00000244728 CDK11BP21127 795 aaKnown RBP11.26□□□□□ -0.61
COL21A1-201ENST00000244728 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ZSCAN30Q86W11 494 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ATP10BO94823 1461 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ADGRL1O94910 1474 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 WDR62O43379 1518 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 UBTFL1P0CB47 393 aaPredicted RBP11.26□□□□□ -0.61
COL21A1-201ENST00000244728 TRIM27P14373 513 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 SSFA2P28290 1259 aa11.26□□□□□ -0.61
COL21A1-201ENST00000244728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
COL21A1-201ENST00000244728 MCM10Q7L590 875 aa11.25□□□□□ -0.61
COL21A1-201ENST00000244728 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
COL21A1-201ENST00000244728 ZMYM4Q5VZL5 1548 aa11.25□□□□□ -0.61
COL21A1-201ENST00000244728 MPNDQ8N594 471 aa11.25□□□□□ -0.61
COL21A1-201ENST00000244728 FAM177BA6PVY3 158 aa11.25□□□□□ -0.61
COL21A1-201ENST00000244728 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL21A1-201ENST00000244728 BLMP54132 1417 aaPredicted RBP11.24□□□□□ -0.61
COL21A1-201ENST00000244728 NEUROD6Q96NK8 337 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 CCDC39Q9UFE4 941 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
COL21A1-201ENST00000244728 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 KDM5BQ9UGL1 1544 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 RPGRIP1LQ68CZ1 1315 aa11.24□□□□□ -0.61
COL21A1-201ENST00000244728 DDX58O95786 925 aaKnown RBP11.23□□□□□ -0.61
COL21A1-201ENST00000244728 NEK4P51957 841 aa11.23□□□□□ -0.61
COL21A1-201ENST00000244728 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-201ENST00000244728 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
COL21A1-201ENST00000244728 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
COL21A1-201ENST00000244728 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
COL21A1-201ENST00000244728 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
COL21A1-201ENST00000244728 SCAF11Q99590 1463 aaKnown RBP11.23□□□□□ -0.61
COL21A1-201ENST00000244728 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 RAPGEF6Q8TEU7 1601 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 UQCRHP07919 91 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 NOS1P29475 1434 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 DENND4BO75064 1496 aaPredicted RBP11.22□□□□□ -0.61
COL21A1-201ENST00000244728 FOXO3O43524 673 aa11.22□□□□□ -0.61
COL21A1-201ENST00000244728 MBD3O95983 291 aa11.21□□□□□ -0.61
COL21A1-201ENST00000244728 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
COL21A1-201ENST00000244728 APPP05067 770 aa11.21□□□□□ -0.61
COL21A1-201ENST00000244728 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
COL21A1-201ENST00000244728 KDM5CP41229 1560 aa11.21□□□□□ -0.62
COL21A1-201ENST00000244728 FCHSD2O94868 740 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms