RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 PPRC1Q5VV67 1664 aaKnown RBP23.32■■□□□ 1.32
CHPF-201ENST00000243776 A0A1W2PP64 1363 aa23.32■■□□□ 1.32
CHPF-201ENST00000243776 HMOX1P09601 288 aa23.32■■□□□ 1.32
CHPF-201ENST00000243776 ANKRD36BQ8N2N9 1353 aa23.32■■□□□ 1.32
CHPF-201ENST00000243776 CHD1LQ86WJ1 897 aa23.32■■□□□ 1.32
CHPF-201ENST00000243776 FYB1O15117 783 aa23.31■■□□□ 1.32
CHPF-201ENST00000243776 GRPEL1Q9HAV7 217 aa23.31■■□□□ 1.32
CHPF-201ENST00000243776 NPATQ14207 1427 aa23.31■■□□□ 1.32
CHPF-201ENST00000243776 NUCB1Q02818 461 aa23.3■■□□□ 1.32
CHPF-201ENST00000243776 EFCAB6Q5THR3 1501 aa23.3■■□□□ 1.32
CHPF-201ENST00000243776 GAS2L3Q86XJ1 694 aa23.3■■□□□ 1.32
CHPF-201ENST00000243776 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
CHPF-201ENST00000243776 UBE2Q2Q8WVN8 375 aa23.29■■□□□ 1.32
CHPF-201ENST00000243776 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
CHPF-201ENST00000243776 INO80Q9ULG1 1556 aaPredicted RBP23.28■■□□□ 1.32
CHPF-201ENST00000243776 TSPYL6Q8N831 410 aa23.28■■□□□ 1.32
CHPF-201ENST00000243776 IPO8O15397 1037 aaKnown RBP23.27■■□□□ 1.32
CHPF-201ENST00000243776 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
CHPF-201ENST00000243776 MRE11P49959 708 aa23.27■■□□□ 1.32
CHPF-201ENST00000243776 ADGRB1O14514 1584 aa23.26■■□□□ 1.31
CHPF-201ENST00000243776 DDX11L8A8MPP1 907 aa23.26■■□□□ 1.31
CHPF-201ENST00000243776 PRAM1Q96QH2 718 aa23.26■■□□□ 1.31
CHPF-201ENST00000243776 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
CHPF-201ENST00000243776 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
CHPF-201ENST00000243776 CT47B1P0C2W7 299 aaPredicted RBP23.25■■□□□ 1.31
CHPF-201ENST00000243776 ERBB4Q15303 1308 aa23.25■■□□□ 1.31
CHPF-201ENST00000243776 TULP4Q9NRJ4 1543 aa23.25■■□□□ 1.31
CHPF-201ENST00000243776 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
CHPF-201ENST00000243776 IFT172Q9UG01 1749 aa23.24■■□□□ 1.31
CHPF-201ENST00000243776 MYO3AQ8NEV4 1616 aa23.24■■□□□ 1.31
CHPF-201ENST00000243776 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 KIF2CQ99661 725 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 RAPGEF3O95398 923 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 IDI1Q13907 227 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 CABP1Q9NZU7 370 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 KIF16BQ96L93 1317 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
CHPF-201ENST00000243776 SSFA2P28290 1259 aa23.22■■□□□ 1.31
CHPF-201ENST00000243776 RBM25P49756 843 aaKnown RBP23.22■■□□□ 1.31
CHPF-201ENST00000243776 TBC1D9Q6ZT07 1266 aa23.22■■□□□ 1.31
CHPF-201ENST00000243776 APBB1O00213 710 aa23.22■■□□□ 1.31
CHPF-201ENST00000243776 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
CHPF-201ENST00000243776 CLCN1P35523 988 aa23.19■■□□□ 1.3
CHPF-201ENST00000243776 DDIT3P35638 169 aa23.19■■□□□ 1.3
CHPF-201ENST00000243776 TERF2IPQ9NYB0 399 aa23.19■■□□□ 1.3
CHPF-201ENST00000243776 ZBTB7BO15156 539 aaPredicted RBP23.19■■□□□ 1.3
CHPF-201ENST00000243776 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
CHPF-201ENST00000243776 TRIM44Q96DX7 344 aaPredicted RBP23.18■■□□□ 1.3
CHPF-201ENST00000243776 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
CHPF-201ENST00000243776 GBP4Q96PP9 640 aa23.18■■□□□ 1.3
CHPF-201ENST00000243776 ESPNB1AK53 854 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 PPIP5K1Q6PFW1 1433 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 KIDINS220Q9ULH0 1771 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 NSD2O96028 1365 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 ASXL2Q76L83 1435 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 NCLP19338 710 aaKnown RBP23.17■■□□□ 1.3
CHPF-201ENST00000243776 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
CHPF-201ENST00000243776 DCTN1Q14203 1278 aa23.16■■□□□ 1.3
CHPF-201ENST00000243776 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
CHPF-201ENST00000243776 SNX21Q969T3 373 aa23.16■■□□□ 1.3
CHPF-201ENST00000243776 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
CHPF-201ENST00000243776 GLI2P10070 1586 aa23.16■■□□□ 1.3
CHPF-201ENST00000243776 RAB3GAP1Q15042 981 aa23.16■■□□□ 1.3
CHPF-201ENST00000243776 CDK19Q9BWU1 502 aa23.16■■□□□ 1.3
CHPF-201ENST00000243776 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
CHPF-201ENST00000243776 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
CHPF-201ENST00000243776 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
CHPF-201ENST00000243776 ADGRB2O60241 1585 aa23.15■■□□□ 1.3
CHPF-201ENST00000243776 VAMP4O75379 141 aa23.15■■□□□ 1.3
CHPF-201ENST00000243776 PPLO60437 1756 aa23.14■■□□□ 1.29
CHPF-201ENST00000243776 K7ELQ4 463 aaPredicted RBP23.14■■□□□ 1.29
CHPF-201ENST00000243776 ZRANB1Q9UGI0 708 aa23.14■■□□□ 1.29
CHPF-201ENST00000243776 EMILIN1Q9Y6C2 1016 aa23.14■■□□□ 1.29
CHPF-201ENST00000243776 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
CHPF-201ENST00000243776 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
CHPF-201ENST00000243776 MRPL50Q8N5N7 158 aaKnown RBP23.14■■□□□ 1.29
CHPF-201ENST00000243776 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
CHPF-201ENST00000243776 IL16Q14005 1332 aa23.13■■□□□ 1.29
CHPF-201ENST00000243776 ALDH1L2Q3SY69 923 aa23.12■■□□□ 1.29
CHPF-201ENST00000243776 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 POLKQ9UBT6 870 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
CHPF-201ENST00000243776 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 OTUD7AQ8TE49 926 aaPredicted RBP23.11■■□□□ 1.29
CHPF-201ENST00000243776 CHAMP1Q96JM3 812 aa23.11■■□□□ 1.29
CHPF-201ENST00000243776 COL3A1P02461 1466 aaPredicted RBP23.1■■□□□ 1.29
CHPF-201ENST00000243776 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
CHPF-201ENST00000243776 FCHSD2O94868 740 aa23.1■■□□□ 1.29
CHPF-201ENST00000243776 NCBP3Q53F19 620 aaKnown RBP23.1■■□□□ 1.29
CHPF-201ENST00000243776 GSPT1P15170 499 aaKnown RBP23.09■■□□□ 1.29
CHPF-201ENST00000243776 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
CHPF-201ENST00000243776 PKP1Q13835 747 aa23.09■■□□□ 1.29
CHPF-201ENST00000243776 NPM1P06748 294 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHPF-201ENST00000243776 KRT24Q2M2I5 525 aa23.08■■□□□ 1.29
CHPF-201ENST00000243776 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.29
CHPF-201ENST00000243776 FOXD4L5Q5VV16 416 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms