RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 CLEC11AQ9Y240 323 aa18.36■□□□□ 0.53
PDZD11-201ENST00000239666 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
PDZD11-201ENST00000239666 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
PDZD11-201ENST00000239666 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
PDZD11-201ENST00000239666 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
PDZD11-201ENST00000239666 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
PDZD11-201ENST00000239666 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
PDZD11-201ENST00000239666 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
PDZD11-201ENST00000239666 TULP4Q9NRJ4 1543 aa18.3■□□□□ 0.52
PDZD11-201ENST00000239666 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
PDZD11-201ENST00000239666 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
PDZD11-201ENST00000239666 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PDZD11-201ENST00000239666 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
PDZD11-201ENST00000239666 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
PDZD11-201ENST00000239666 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
PDZD11-201ENST00000239666 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDZD11-201ENST00000239666 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
PDZD11-201ENST00000239666 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
PDZD11-201ENST00000239666 ATRNO75882 1429 aa18.25■□□□□ 0.51
PDZD11-201ENST00000239666 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
PDZD11-201ENST00000239666 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
PDZD11-201ENST00000239666 ATAD2Q6PL18 1390 aa18.24■□□□□ 0.51
PDZD11-201ENST00000239666 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.23■□□□□ 0.51
PDZD11-201ENST00000239666 PITPNM1O00562 1244 aa18.23■□□□□ 0.51
PDZD11-201ENST00000239666 CCDC125Q86Z20 511 aa18.23■□□□□ 0.51
PDZD11-201ENST00000239666 CDK19Q9BWU1 502 aa18.23■□□□□ 0.51
PDZD11-201ENST00000239666 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
PDZD11-201ENST00000239666 BCL9LQ86UU0 1499 aa18.22■□□□□ 0.51
PDZD11-201ENST00000239666 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
PDZD11-201ENST00000239666 MIER1Q8N108 512 aa18.22■□□□□ 0.51
PDZD11-201ENST00000239666 PLCD3Q8N3E9 789 aa18.22■□□□□ 0.51
PDZD11-201ENST00000239666 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
PDZD11-201ENST00000239666 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
PDZD11-201ENST00000239666 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
PDZD11-201ENST00000239666 SLIT2O94813 1529 aa18.21■□□□□ 0.51
PDZD11-201ENST00000239666 RGS12O14924 1447 aa18.21■□□□□ 0.51
PDZD11-201ENST00000239666 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
PDZD11-201ENST00000239666 NWD2Q9ULI1 1742 aa18.2■□□□□ 0.5
PDZD11-201ENST00000239666 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
PDZD11-201ENST00000239666 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
PDZD11-201ENST00000239666 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
PDZD11-201ENST00000239666 VPS72Q15906 364 aa18.18■□□□□ 0.5
PDZD11-201ENST00000239666 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
PDZD11-201ENST00000239666 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
PDZD11-201ENST00000239666 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
PDZD11-201ENST00000239666 ATP7BP35670 1465 aa18.17■□□□□ 0.5
PDZD11-201ENST00000239666 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
PDZD11-201ENST00000239666 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
PDZD11-201ENST00000239666 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
PDZD11-201ENST00000239666 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
PDZD11-201ENST00000239666 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
PDZD11-201ENST00000239666 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
PDZD11-201ENST00000239666 CCDC9Q9Y3X0 531 aaKnown RBP18.15■□□□□ 0.5
PDZD11-201ENST00000239666 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
PDZD11-201ENST00000239666 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
PDZD11-201ENST00000239666 ACEP12821 1306 aa18.14■□□□□ 0.49
PDZD11-201ENST00000239666 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
PDZD11-201ENST00000239666 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
PDZD11-201ENST00000239666 ONECUT3O60422 494 aaPredicted RBP18.13■□□□□ 0.49
PDZD11-201ENST00000239666 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
PDZD11-201ENST00000239666 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
PDZD11-201ENST00000239666 NLRP13Q86W25 1043 aa18.12■□□□□ 0.49
PDZD11-201ENST00000239666 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
PDZD11-201ENST00000239666 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
PDZD11-201ENST00000239666 IFNLR1Q8IU57 520 aaPredicted RBP18.11■□□□□ 0.49
PDZD11-201ENST00000239666 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
PDZD11-201ENST00000239666 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
PDZD11-201ENST00000239666 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
PDZD11-201ENST00000239666 PLCH1Q4KWH8 1693 aa18.1■□□□□ 0.49
PDZD11-201ENST00000239666 KLHL34Q8N239 644 aa18.1■□□□□ 0.49
PDZD11-201ENST00000239666 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
PDZD11-201ENST00000239666 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
PDZD11-201ENST00000239666 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
PDZD11-201ENST00000239666 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
PDZD11-201ENST00000239666 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
PDZD11-201ENST00000239666 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.49
PDZD11-201ENST00000239666 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
PDZD11-201ENST00000239666 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
PDZD11-201ENST00000239666 GLI3P10071 1580 aa18.05■□□□□ 0.48
PDZD11-201ENST00000239666 A0A0G2JS52 829 aa18.05■□□□□ 0.48
PDZD11-201ENST00000239666 EVA1CP58658 441 aa18.05■□□□□ 0.48
PDZD11-201ENST00000239666 MYT1Q01538 1121 aa18.05■□□□□ 0.48
PDZD11-201ENST00000239666 KRT27Q7Z3Y8 459 aa18.05■□□□□ 0.48
PDZD11-201ENST00000239666 CARD11Q9BXL7 1154 aa18.04■□□□□ 0.48
PDZD11-201ENST00000239666 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
PDZD11-201ENST00000239666 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
PDZD11-201ENST00000239666 SPATA31A5Q5VU36 1347 aa18.02■□□□□ 0.48
PDZD11-201ENST00000239666 SPATA31A7Q8IWB4 1347 aa18.02■□□□□ 0.48
PDZD11-201ENST00000239666 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.48
PDZD11-201ENST00000239666 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
PDZD11-201ENST00000239666 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
PDZD11-201ENST00000239666 CRYBG1Q9Y4K1 1723 aa18.02■□□□□ 0.48
PDZD11-201ENST00000239666 CPDO75976 1380 aa18.02■□□□□ 0.47
PDZD11-201ENST00000239666 KIAA0232Q92628 1395 aa18.02■□□□□ 0.47
PDZD11-201ENST00000239666 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
PDZD11-201ENST00000239666 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
PDZD11-201ENST00000239666 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
PDZD11-201ENST00000239666 GCP02774 474 aa18■□□□□ 0.47
PDZD11-201ENST00000239666 NLRP6P59044 892 aa18■□□□□ 0.47
PDZD11-201ENST00000239666 ZC3H6P61129 1189 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms