RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TTC21BQ7Z4L5 1316 aa20.3■□□□□ 0.84
HDHD3-201ENST00000238379 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
HDHD3-201ENST00000238379 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
HDHD3-201ENST00000238379 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
HDHD3-201ENST00000238379 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
HDHD3-201ENST00000238379 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
HDHD3-201ENST00000238379 COG3Q96JB2 828 aa20.25■□□□□ 0.83
HDHD3-201ENST00000238379 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
HDHD3-201ENST00000238379 STRCQ7RTU9 1775 aa20.24■□□□□ 0.83
HDHD3-201ENST00000238379 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
HDHD3-201ENST00000238379 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
HDHD3-201ENST00000238379 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
HDHD3-201ENST00000238379 COL3A1P02461 1466 aaPredicted RBP20.24■□□□□ 0.83
HDHD3-201ENST00000238379 FBLN1P23142 703 aa20.23■□□□□ 0.83
HDHD3-201ENST00000238379 STRCP1A6NGW2 1772 aa20.23■□□□□ 0.83
HDHD3-201ENST00000238379 TTC21AQ8NDW8 1320 aa20.23■□□□□ 0.83
HDHD3-201ENST00000238379 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
HDHD3-201ENST00000238379 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
HDHD3-201ENST00000238379 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
HDHD3-201ENST00000238379 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
HDHD3-201ENST00000238379 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
HDHD3-201ENST00000238379 PHF8Q9UPP1 1060 aa20.21■□□□□ 0.83
HDHD3-201ENST00000238379 C19orf44Q9H6X5 657 aa20.2■□□□□ 0.82
HDHD3-201ENST00000238379 TMEM94Q12767 1356 aa20.19■□□□□ 0.82
HDHD3-201ENST00000238379 MAP2P11137 1827 aaKnown RBP20.19■□□□□ 0.82
HDHD3-201ENST00000238379 PDE3BQ13370 1112 aa20.19■□□□□ 0.82
HDHD3-201ENST00000238379 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
HDHD3-201ENST00000238379 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
HDHD3-201ENST00000238379 USP31Q70CQ4 1352 aa20.17■□□□□ 0.82
HDHD3-201ENST00000238379 APAF1O14727 1248 aa20.17■□□□□ 0.82
HDHD3-201ENST00000238379 ESCO1Q5FWF5 840 aa20.17■□□□□ 0.82
HDHD3-201ENST00000238379 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
HDHD3-201ENST00000238379 DIAPH1O60610 1272 aaKnown RBP20.16■□□□□ 0.82
HDHD3-201ENST00000238379 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
HDHD3-201ENST00000238379 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
HDHD3-201ENST00000238379 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
HDHD3-201ENST00000238379 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
HDHD3-201ENST00000238379 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
HDHD3-201ENST00000238379 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
HDHD3-201ENST00000238379 CDK12Q9NYV4 1490 aaPredicted RBP20.15■□□□□ 0.82
HDHD3-201ENST00000238379 RRS1Q15050 365 aaKnown RBP20.14■□□□□ 0.81
HDHD3-201ENST00000238379 ORAI2Q96SN7 254 aa20.14■□□□□ 0.81
HDHD3-201ENST00000238379 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
HDHD3-201ENST00000238379 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
HDHD3-201ENST00000238379 DCCP43146 1447 aa20.13■□□□□ 0.81
HDHD3-201ENST00000238379 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
HDHD3-201ENST00000238379 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
HDHD3-201ENST00000238379 C1orf167Q5SNV9 1468 aa20.12■□□□□ 0.81
HDHD3-201ENST00000238379 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
HDHD3-201ENST00000238379 ATF3P18847 181 aa20.1■□□□□ 0.81
HDHD3-201ENST00000238379 NLRP6P59044 892 aa20.1■□□□□ 0.81
HDHD3-201ENST00000238379 PSME1Q06323 249 aa20.1■□□□□ 0.81
HDHD3-201ENST00000238379 TCP11L2Q8N4U5 519 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 USP54Q70EL1 1684 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 MST1RQ04912 1400 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 PAK3O75914 559 aaPredicted RBP20.09■□□□□ 0.81
HDHD3-201ENST00000238379 IL13P35225 146 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
HDHD3-201ENST00000238379 ZNF335Q9H4Z2 1342 aaPredicted RBP20.08■□□□□ 0.81
HDHD3-201ENST00000238379 FOXO3O43524 673 aa20.08■□□□□ 0.8
HDHD3-201ENST00000238379 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
HDHD3-201ENST00000238379 XIRP1Q702N8 1843 aaKnown RBP20.07■□□□□ 0.8
HDHD3-201ENST00000238379 GOLGA2Q08379 1002 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 KIF1AQ12756 1690 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 NEFLP07196 543 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
HDHD3-201ENST00000238379 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
HDHD3-201ENST00000238379 MSH6P52701 1360 aa20.06■□□□□ 0.8
HDHD3-201ENST00000238379 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
HDHD3-201ENST00000238379 FCHSD2O94868 740 aa20.05■□□□□ 0.8
HDHD3-201ENST00000238379 FKBP8Q14318 412 aa20.05■□□□□ 0.8
HDHD3-201ENST00000238379 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
HDHD3-201ENST00000238379 PEAK1Q9H792 1746 aa20.05■□□□□ 0.8
HDHD3-201ENST00000238379 SOX12O15370 315 aa20.04■□□□□ 0.8
HDHD3-201ENST00000238379 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
HDHD3-201ENST00000238379 RRP7AQ9Y3A4 280 aaKnown RBP20.04■□□□□ 0.8
HDHD3-201ENST00000238379 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
HDHD3-201ENST00000238379 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
HDHD3-201ENST00000238379 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
HDHD3-201ENST00000238379 SLFN5Q08AF3 891 aa20.02■□□□□ 0.8
HDHD3-201ENST00000238379 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
HDHD3-201ENST00000238379 SBNO1A3KN83 1393 aa20.02■□□□□ 0.8
HDHD3-201ENST00000238379 XPCQ01831 940 aaPredicted RBP20.02■□□□□ 0.79
HDHD3-201ENST00000238379 EIF4A2Q14240 407 aaKnown RBP20.02■□□□□ 0.79
HDHD3-201ENST00000238379 NEUROD2Q15784 382 aa20.02■□□□□ 0.79
HDHD3-201ENST00000238379 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.79
HDHD3-201ENST00000238379 DUSP27Q5VZP5 1158 aa20.02■□□□□ 0.79
HDHD3-201ENST00000238379 TRMT2AQ8IZ69 625 aaKnown RBP20.02■□□□□ 0.79
HDHD3-201ENST00000238379 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
HDHD3-201ENST00000238379 KRT28Q7Z3Y7 464 aa20.01■□□□□ 0.79
HDHD3-201ENST00000238379 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
HDHD3-201ENST00000238379 FLT4P35916 1363 aa20■□□□□ 0.79
HDHD3-201ENST00000238379 TRPM3Q9HCF6 1732 aaPredicted RBP19.99■□□□□ 0.79
HDHD3-201ENST00000238379 MAPK8IP3Q9UPT6 1336 aa19.99■□□□□ 0.79
HDHD3-201ENST00000238379 HMOX1P09601 288 aa19.99■□□□□ 0.79
HDHD3-201ENST00000238379 PRKAR2BP31323 418 aa19.99■□□□□ 0.79
HDHD3-201ENST00000238379 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms