RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
SF3B6-201ENST00000233468 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
SF3B6-201ENST00000233468 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
SF3B6-201ENST00000233468 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
SF3B6-201ENST00000233468 BRWD3Q6RI45 1802 aa15.94■□□□□ 0.14
SF3B6-201ENST00000233468 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
SF3B6-201ENST00000233468 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
SF3B6-201ENST00000233468 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
SF3B6-201ENST00000233468 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
SF3B6-201ENST00000233468 GJD4Q96KN9 370 aaPredicted RBP15.93■□□□□ 0.14
SF3B6-201ENST00000233468 HIRIP3Q9BW71 556 aaPredicted RBP15.93■□□□□ 0.14
SF3B6-201ENST00000233468 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.93■□□□□ 0.14
SF3B6-201ENST00000233468 GLI3P10071 1580 aa15.92■□□□□ 0.14
SF3B6-201ENST00000233468 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
SF3B6-201ENST00000233468 USP32Q8NFA0 1604 aa15.9■□□□□ 0.14
SF3B6-201ENST00000233468 SLIT2O94813 1529 aa15.9■□□□□ 0.14
SF3B6-201ENST00000233468 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
SF3B6-201ENST00000233468 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
SF3B6-201ENST00000233468 UNC5CLQ8IV45 518 aa15.89■□□□□ 0.13
SF3B6-201ENST00000233468 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
SF3B6-201ENST00000233468 PHF8Q9UPP1 1060 aa15.89■□□□□ 0.13
SF3B6-201ENST00000233468 EVC2Q86UK5 1308 aa15.89■□□□□ 0.13
SF3B6-201ENST00000233468 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
SF3B6-201ENST00000233468 PLCH1Q4KWH8 1693 aa15.88■□□□□ 0.13
SF3B6-201ENST00000233468 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
SF3B6-201ENST00000233468 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
SF3B6-201ENST00000233468 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
SF3B6-201ENST00000233468 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
SF3B6-201ENST00000233468 TNS3Q68CZ2 1445 aa15.85■□□□□ 0.13
SF3B6-201ENST00000233468 PSME1Q06323 249 aa15.85■□□□□ 0.13
SF3B6-201ENST00000233468 NUDT16Q96DE0 195 aaKnown RBP15.85■□□□□ 0.13
SF3B6-201ENST00000233468 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
SF3B6-201ENST00000233468 HAP1P54257 671 aaPredicted RBP15.84■□□□□ 0.13
SF3B6-201ENST00000233468 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
SF3B6-201ENST00000233468 ARHGEF28Q8N1W1 1705 aaKnown RBP15.83■□□□□ 0.13
SF3B6-201ENST00000233468 NGDNQ8NEJ9 315 aaKnown RBP15.83■□□□□ 0.12
SF3B6-201ENST00000233468 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
SF3B6-201ENST00000233468 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.12
SF3B6-201ENST00000233468 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
SF3B6-201ENST00000233468 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
SF3B6-201ENST00000233468 FAM83GA6ND36 823 aa15.82■□□□□ 0.12
SF3B6-201ENST00000233468 CCDC125Q86Z20 511 aa15.82■□□□□ 0.12
SF3B6-201ENST00000233468 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
SF3B6-201ENST00000233468 ST20-MTHFSA0A0A6YYL1 179 aa15.81■□□□□ 0.12
SF3B6-201ENST00000233468 SBNO1A3KN83 1393 aa15.81■□□□□ 0.12
SF3B6-201ENST00000233468 DEFB132Q7Z7B7 95 aa15.81■□□□□ 0.12
SF3B6-201ENST00000233468 USP47Q96K76 1375 aa15.81■□□□□ 0.12
SF3B6-201ENST00000233468 PRR36Q9H6K5 1346 aa15.8■□□□□ 0.12
SF3B6-201ENST00000233468 VPS72Q15906 364 aa15.8■□□□□ 0.12
SF3B6-201ENST00000233468 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
SF3B6-201ENST00000233468 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
SF3B6-201ENST00000233468 CABP2Q9NPB3 220 aa15.8■□□□□ 0.12
SF3B6-201ENST00000233468 CCDC9Q9Y3X0 531 aaKnown RBP15.8■□□□□ 0.12
SF3B6-201ENST00000233468 ALS2Q96Q42 1657 aa15.79■□□□□ 0.12
SF3B6-201ENST00000233468 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
SF3B6-201ENST00000233468 NRAPQ86VF7 1730 aa15.79■□□□□ 0.12
SF3B6-201ENST00000233468 BLMP54132 1417 aaPredicted RBP15.78■□□□□ 0.12
SF3B6-201ENST00000233468 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
SF3B6-201ENST00000233468 TMF1P82094 1093 aa15.78■□□□□ 0.12
SF3B6-201ENST00000233468 ARHGEF10O15013 1369 aa15.77■□□□□ 0.12
SF3B6-201ENST00000233468 ONECUT3O60422 494 aaPredicted RBP15.77■□□□□ 0.12
SF3B6-201ENST00000233468 ATP7BP35670 1465 aa15.77■□□□□ 0.11
SF3B6-201ENST00000233468 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
SF3B6-201ENST00000233468 TESK2Q96S53 571 aa15.75■□□□□ 0.11
SF3B6-201ENST00000233468 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
SF3B6-201ENST00000233468 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
SF3B6-201ENST00000233468 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
SF3B6-201ENST00000233468 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
SF3B6-201ENST00000233468 ACEP12821 1306 aa15.74■□□□□ 0.11
SF3B6-201ENST00000233468 QRICH2Q9H0J4 1663 aa15.74■□□□□ 0.11
SF3B6-201ENST00000233468 FAM98CQ17RN3 349 aaKnown RBP15.74■□□□□ 0.11
SF3B6-201ENST00000233468 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
SF3B6-201ENST00000233468 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
SF3B6-201ENST00000233468 BRD4O60885 1362 aaPredicted RBP15.74■□□□□ 0.11
SF3B6-201ENST00000233468 COL14A1Q05707 1796 aaKnown RBP15.73■□□□□ 0.11
SF3B6-201ENST00000233468 A0A0G2JS52 829 aa15.73■□□□□ 0.11
SF3B6-201ENST00000233468 MYT1Q01538 1121 aa15.73■□□□□ 0.11
SF3B6-201ENST00000233468 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
SF3B6-201ENST00000233468 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
SF3B6-201ENST00000233468 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
SF3B6-201ENST00000233468 TMC1Q8TDI8 760 aa15.71■□□□□ 0.11
SF3B6-201ENST00000233468 NINLQ9Y2I6 1382 aa15.71■□□□□ 0.11
SF3B6-201ENST00000233468 SF3B2Q13435 895 aaKnown RBP15.7■□□□□ 0.1
SF3B6-201ENST00000233468 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
SF3B6-201ENST00000233468 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
SF3B6-201ENST00000233468 ITSN1Q15811 1721 aa15.69■□□□□ 0.1
SF3B6-201ENST00000233468 HSPA5P11021 654 aaKnown RBP15.69■□□□□ 0.1
SF3B6-201ENST00000233468 NUTM2GQ5VZR2 741 aa15.68■□□□□ 0.1
SF3B6-201ENST00000233468 SPATA31A5Q5VU36 1347 aa15.68■□□□□ 0.1
SF3B6-201ENST00000233468 SPATA31A7Q8IWB4 1347 aa15.68■□□□□ 0.1
SF3B6-201ENST00000233468 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
SF3B6-201ENST00000233468 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
SF3B6-201ENST00000233468 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
SF3B6-201ENST00000233468 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SF3B6-201ENST00000233468 ABTB2Q8N961 1025 aa15.66■□□□□ 0.1
SF3B6-201ENST00000233468 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
SF3B6-201ENST00000233468 EN1Q05925 392 aaPredicted RBP15.65■□□□□ 0.1
SF3B6-201ENST00000233468 SLC12A5Q9H2X9 1139 aa15.65■□□□□ 0.1
SF3B6-201ENST00000233468 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
SF3B6-201ENST00000233468 KTN1Q86UP2 1357 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms