RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 SKOR2Q2VWA4 1001 aaPredicted RBP12.94□□□□□ -0.34
MCM3-201ENST00000229854 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
MCM3-201ENST00000229854 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
MCM3-201ENST00000229854 CD109Q6YHK3 1445 aa12.93□□□□□ -0.34
MCM3-201ENST00000229854 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
MCM3-201ENST00000229854 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
MCM3-201ENST00000229854 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
MCM3-201ENST00000229854 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
MCM3-201ENST00000229854 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 UQCRHP07919 91 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
MCM3-201ENST00000229854 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 ARHGAP31Q2M1Z3 1444 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 PPP1R9BQ96SB3 815 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 ZHX1Q9UKY1 873 aaPredicted RBP12.91□□□□□ -0.34
MCM3-201ENST00000229854 MYO5BQ9ULV0 1848 aa12.91□□□□□ -0.34
MCM3-201ENST00000229854 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
MCM3-201ENST00000229854 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
MCM3-201ENST00000229854 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
MCM3-201ENST00000229854 DDX49Q9Y6V7 483 aaKnown RBP12.9□□□□□ -0.34
MCM3-201ENST00000229854 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.35
MCM3-201ENST00000229854 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
MCM3-201ENST00000229854 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
MCM3-201ENST00000229854 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
MCM3-201ENST00000229854 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
MCM3-201ENST00000229854 AAMPQ13685 434 aa12.89□□□□□ -0.35
MCM3-201ENST00000229854 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
MCM3-201ENST00000229854 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
MCM3-201ENST00000229854 PTMSP20962 102 aa12.88□□□□□ -0.35
MCM3-201ENST00000229854 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
MCM3-201ENST00000229854 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
MCM3-201ENST00000229854 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
MCM3-201ENST00000229854 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
MCM3-201ENST00000229854 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
MCM3-201ENST00000229854 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
MCM3-201ENST00000229854 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
MCM3-201ENST00000229854 TERF1P54274 439 aa12.87□□□□□ -0.35
MCM3-201ENST00000229854 SMC5Q8IY18 1101 aa12.87□□□□□ -0.35
MCM3-201ENST00000229854 ZMYM3Q14202 1370 aa12.86□□□□□ -0.35
MCM3-201ENST00000229854 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
MCM3-201ENST00000229854 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
MCM3-201ENST00000229854 SSFA2P28290 1259 aa12.86□□□□□ -0.35
MCM3-201ENST00000229854 DDIT3P35638 169 aa12.86□□□□□ -0.35
MCM3-201ENST00000229854 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
MCM3-201ENST00000229854 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
MCM3-201ENST00000229854 SNX21Q969T3 373 aa12.84□□□□□ -0.35
MCM3-201ENST00000229854 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
MCM3-201ENST00000229854 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
MCM3-201ENST00000229854 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
MCM3-201ENST00000229854 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
MCM3-201ENST00000229854 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
MCM3-201ENST00000229854 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
MCM3-201ENST00000229854 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
MCM3-201ENST00000229854 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
MCM3-201ENST00000229854 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
MCM3-201ENST00000229854 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
MCM3-201ENST00000229854 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
MCM3-201ENST00000229854 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
MCM3-201ENST00000229854 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
MCM3-201ENST00000229854 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
MCM3-201ENST00000229854 DYNC1I1O14576 645 aa12.81□□□□□ -0.36
MCM3-201ENST00000229854 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
MCM3-201ENST00000229854 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
MCM3-201ENST00000229854 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
MCM3-201ENST00000229854 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
MCM3-201ENST00000229854 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
MCM3-201ENST00000229854 BAG4O95429 457 aaKnown RBP12.8□□□□□ -0.36
MCM3-201ENST00000229854 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
MCM3-201ENST00000229854 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
MCM3-201ENST00000229854 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
MCM3-201ENST00000229854 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
MCM3-201ENST00000229854 ZNF500O60304 480 aaPredicted RBP12.8□□□□□ -0.36
MCM3-201ENST00000229854 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
MCM3-201ENST00000229854 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
MCM3-201ENST00000229854 FGD1P98174 961 aa12.8□□□□□ -0.36
MCM3-201ENST00000229854 PTPRMP28827 1452 aa12.79□□□□□ -0.36
MCM3-201ENST00000229854 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
MCM3-201ENST00000229854 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
MCM3-201ENST00000229854 DNTTIP2Q5QJE6 756 aaKnown RBP12.79□□□□□ -0.36
MCM3-201ENST00000229854 PHF23Q9BUL5 403 aaPredicted RBP12.79□□□□□ -0.36
MCM3-201ENST00000229854 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
MCM3-201ENST00000229854 SASS6Q6UVJ0 657 aa12.78□□□□□ -0.36
MCM3-201ENST00000229854 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
MCM3-201ENST00000229854 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
MCM3-201ENST00000229854 NSD2O96028 1365 aa12.78□□□□□ -0.36
MCM3-201ENST00000229854 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.36
MCM3-201ENST00000229854 RUNDC1Q96C34 613 aa12.77□□□□□ -0.36
MCM3-201ENST00000229854 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.36
MCM3-201ENST00000229854 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.36
MCM3-201ENST00000229854 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
MCM3-201ENST00000229854 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
MCM3-201ENST00000229854 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
MCM3-201ENST00000229854 ZNF445P59923 1031 aa12.77□□□□□ -0.37
MCM3-201ENST00000229854 YEATS2Q9ULM3 1422 aa12.77□□□□□ -0.37
MCM3-201ENST00000229854 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
MCM3-201ENST00000229854 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
MCM3-201ENST00000229854 MED14O60244 1454 aa12.76□□□□□ -0.37
MCM3-201ENST00000229854 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
MCM3-201ENST00000229854 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms