RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
NFKB1-201ENST00000226574 BICD2Q8TD16 824 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 MCM10Q7L590 875 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
NFKB1-201ENST00000226574 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NFKB1-201ENST00000226574 BECN2A8MW95 431 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
NFKB1-201ENST00000226574 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
NFKB1-201ENST00000226574 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 F6X3S4 739 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
NFKB1-201ENST00000226574 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
NFKB1-201ENST00000226574 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
NFKB1-201ENST00000226574 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
NFKB1-201ENST00000226574 ZKSCAN1P17029 563 aaPredicted RBP16.68■□□□□ 0.26
NFKB1-201ENST00000226574 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
NFKB1-201ENST00000226574 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
NFKB1-201ENST00000226574 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
NFKB1-201ENST00000226574 CCDC173Q0VFZ6 552 aa16.67■□□□□ 0.26
NFKB1-201ENST00000226574 GOLGA6L19H0YKK7 550 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 NLRP6P59044 892 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 CEBPZQ03701 1054 aaKnown RBP16.66■□□□□ 0.26
NFKB1-201ENST00000226574 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
NFKB1-201ENST00000226574 KDM4AO75164 1064 aa16.65■□□□□ 0.26
NFKB1-201ENST00000226574 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
NFKB1-201ENST00000226574 NPHP1O15259 732 aa16.65■□□□□ 0.26
NFKB1-201ENST00000226574 RBM27Q9P2N5 1060 aaKnown RBP16.65■□□□□ 0.26
NFKB1-201ENST00000226574 ERC2O15083 957 aa16.65■□□□□ 0.26
NFKB1-201ENST00000226574 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
NFKB1-201ENST00000226574 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
NFKB1-201ENST00000226574 EID1Q9Y6B2 187 aa16.63■□□□□ 0.25
NFKB1-201ENST00000226574 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
NFKB1-201ENST00000226574 NME9Q86XW9 330 aa16.63■□□□□ 0.25
NFKB1-201ENST00000226574 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
NFKB1-201ENST00000226574 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
NFKB1-201ENST00000226574 CCAR2Q8N163 923 aaKnown RBP16.63■□□□□ 0.25
NFKB1-201ENST00000226574 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
NFKB1-201ENST00000226574 FCHSD2O94868 740 aa16.62■□□□□ 0.25
NFKB1-201ENST00000226574 STK3Q13188 491 aa16.62■□□□□ 0.25
NFKB1-201ENST00000226574 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
NFKB1-201ENST00000226574 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
NFKB1-201ENST00000226574 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
NFKB1-201ENST00000226574 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
NFKB1-201ENST00000226574 GNAI2P04899 355 aa16.61■□□□□ 0.25
NFKB1-201ENST00000226574 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
NFKB1-201ENST00000226574 TSPY26PQ9H489 355 aa16.61■□□□□ 0.25
NFKB1-201ENST00000226574 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
NFKB1-201ENST00000226574 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
NFKB1-201ENST00000226574 NINLQ9Y2I6 1382 aa16.61■□□□□ 0.25
NFKB1-201ENST00000226574 ZSCAN30Q86W11 494 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 UQCRHLA0A096LP55 91 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 UQCRHP07919 91 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
NFKB1-201ENST00000226574 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 MBD3O95983 291 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
NFKB1-201ENST00000226574 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
NFKB1-201ENST00000226574 SIL1Q9H173 461 aa16.6■□□□□ 0.25
NFKB1-201ENST00000226574 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 DTNBO60941 627 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
NFKB1-201ENST00000226574 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.25
NFKB1-201ENST00000226574 GNAI3P08754 354 aa16.58■□□□□ 0.25
NFKB1-201ENST00000226574 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.25
NFKB1-201ENST00000226574 CLASRPQ8N2M8 674 aaKnown RBP16.58■□□□□ 0.25
NFKB1-201ENST00000226574 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.25
NFKB1-201ENST00000226574 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.25
NFKB1-201ENST00000226574 IDI1Q13907 227 aa16.58■□□□□ 0.24
NFKB1-201ENST00000226574 C1orf141Q5JVX7 400 aa16.58■□□□□ 0.24
NFKB1-201ENST00000226574 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
NFKB1-201ENST00000226574 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
NFKB1-201ENST00000226574 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
NFKB1-201ENST00000226574 NEUROD6Q96NK8 337 aa16.57■□□□□ 0.24
NFKB1-201ENST00000226574 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
NFKB1-201ENST00000226574 PZPP20742 1482 aa16.57■□□□□ 0.24
NFKB1-201ENST00000226574 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
NFKB1-201ENST00000226574 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 TPM2P07951 284 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 SPATA31E1Q6ZUB1 1445 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
NFKB1-201ENST00000226574 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
NFKB1-201ENST00000226574 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
NFKB1-201ENST00000226574 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
NFKB1-201ENST00000226574 CUL7Q14999 1698 aa16.55■□□□□ 0.24
NFKB1-201ENST00000226574 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms