RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 SMC4Q9NTJ3 1288 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
VTN-201ENST00000226218 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
VTN-201ENST00000226218 CIZ1Q9ULV3 898 aaPredicted RBP19.46■□□□□ 0.71
VTN-201ENST00000226218 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
VTN-201ENST00000226218 NAP1L5Q96NT1 182 aaPredicted RBP19.46■□□□□ 0.71
VTN-201ENST00000226218 ZBTB40Q9NUA8 1239 aa19.46■□□□□ 0.71
VTN-201ENST00000226218 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
VTN-201ENST00000226218 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
VTN-201ENST00000226218 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
VTN-201ENST00000226218 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
VTN-201ENST00000226218 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
VTN-201ENST00000226218 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
VTN-201ENST00000226218 IL16Q14005 1332 aa19.44■□□□□ 0.7
VTN-201ENST00000226218 NUCB1Q02818 461 aa19.43■□□□□ 0.7
VTN-201ENST00000226218 ITPRIPQ8IWB1 547 aa19.43■□□□□ 0.7
VTN-201ENST00000226218 RAB3GAP1Q15042 981 aa19.43■□□□□ 0.7
VTN-201ENST00000226218 TMEM57Q8N5G2 664 aa19.43■□□□□ 0.7
VTN-201ENST00000226218 MED14O60244 1454 aa19.42■□□□□ 0.7
VTN-201ENST00000226218 ESPNB1AK53 854 aa19.42■□□□□ 0.7
VTN-201ENST00000226218 TMPOP42166 694 aaKnown RBP19.42■□□□□ 0.7
VTN-201ENST00000226218 KIF2CQ99661 725 aa19.42■□□□□ 0.7
VTN-201ENST00000226218 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
VTN-201ENST00000226218 GAS2L3Q86XJ1 694 aa19.41■□□□□ 0.7
VTN-201ENST00000226218 NPATQ14207 1427 aa19.39■□□□□ 0.69
VTN-201ENST00000226218 RRP9O43818 475 aaKnown RBP19.39■□□□□ 0.69
VTN-201ENST00000226218 KIF16BQ96L93 1317 aa19.38■□□□□ 0.69
VTN-201ENST00000226218 CAMSAP1Q5T5Y3 1602 aa19.38■□□□□ 0.69
VTN-201ENST00000226218 BMP2KLQ5H9B9 411 aa19.38■□□□□ 0.69
VTN-201ENST00000226218 TMEM132EQ6IEE7 984 aa19.38■□□□□ 0.69
VTN-201ENST00000226218 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
VTN-201ENST00000226218 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
VTN-201ENST00000226218 SKOR2Q2VWA4 1001 aaPredicted RBP19.37■□□□□ 0.69
VTN-201ENST00000226218 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
VTN-201ENST00000226218 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
VTN-201ENST00000226218 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
VTN-201ENST00000226218 REREQ9P2R6 1566 aa19.37■□□□□ 0.69
VTN-201ENST00000226218 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 EVC2Q86UK5 1308 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 ARHGAP31Q2M1Z3 1444 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 PTMSP20962 102 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 CDC42BPGQ6DT37 1551 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
VTN-201ENST00000226218 ALDH1L2Q3SY69 923 aa19.35■□□□□ 0.69
VTN-201ENST00000226218 LNPKQ9C0E8 428 aa19.35■□□□□ 0.69
VTN-201ENST00000226218 A0A1W2PP64 1363 aa19.34■□□□□ 0.69
VTN-201ENST00000226218 CD2BP2O95400 341 aaKnown RBP19.34■□□□□ 0.69
VTN-201ENST00000226218 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
VTN-201ENST00000226218 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
VTN-201ENST00000226218 NEXMIFQ5QGS0 1516 aa19.34■□□□□ 0.69
VTN-201ENST00000226218 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
VTN-201ENST00000226218 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
VTN-201ENST00000226218 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.69
VTN-201ENST00000226218 HSP90AA2PQ14568 343 aaPredicted RBP19.33■□□□□ 0.69
VTN-201ENST00000226218 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.69
VTN-201ENST00000226218 FRMPD1Q5SYB0 1578 aa19.33■□□□□ 0.69
VTN-201ENST00000226218 SIGLEC1Q9BZZ2 1709 aa19.33■□□□□ 0.69
VTN-201ENST00000226218 PIK3R4Q99570 1358 aa19.33■□□□□ 0.68
VTN-201ENST00000226218 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.68
VTN-201ENST00000226218 CLTCQ00610 1675 aaKnown RBP19.32■□□□□ 0.68
VTN-201ENST00000226218 PPP1R9BQ96SB3 815 aa19.31■□□□□ 0.68
VTN-201ENST00000226218 K7ELQ4 463 aaPredicted RBP19.31■□□□□ 0.68
VTN-201ENST00000226218 PNPLA6Q8IY17 1366 aa19.31■□□□□ 0.68
VTN-201ENST00000226218 PTCH1Q13635 1447 aa19.3■□□□□ 0.68
VTN-201ENST00000226218 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
VTN-201ENST00000226218 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
VTN-201ENST00000226218 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
VTN-201ENST00000226218 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
VTN-201ENST00000226218 RIPK4P57078 832 aa19.29■□□□□ 0.68
VTN-201ENST00000226218 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
VTN-201ENST00000226218 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
VTN-201ENST00000226218 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
VTN-201ENST00000226218 KIF20BQ96Q89 1820 aa19.29■□□□□ 0.68
VTN-201ENST00000226218 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
VTN-201ENST00000226218 ABCC3O15438 1527 aa19.28■□□□□ 0.68
VTN-201ENST00000226218 TBC1D9Q6ZT07 1266 aa19.28■□□□□ 0.68
VTN-201ENST00000226218 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.68
VTN-201ENST00000226218 ZNF428Q96B54 188 aa19.27■□□□□ 0.68
VTN-201ENST00000226218 AK9Q5TCS8 1911 aa19.27■□□□□ 0.67
VTN-201ENST00000226218 TPM2P07951 284 aa19.27■□□□□ 0.67
VTN-201ENST00000226218 SSFA2P28290 1259 aa19.27■□□□□ 0.67
VTN-201ENST00000226218 GAS2L2Q8NHY3 880 aa19.26■□□□□ 0.67
VTN-201ENST00000226218 GGNBP2Q9H3C7 697 aa19.26■□□□□ 0.67
VTN-201ENST00000226218 FAM135BQ49AJ0 1406 aa19.26■□□□□ 0.67
VTN-201ENST00000226218 KLHL40Q2TBA0 621 aa19.25■□□□□ 0.67
VTN-201ENST00000226218 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
VTN-201ENST00000226218 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
VTN-201ENST00000226218 FYB1O15117 783 aa19.24■□□□□ 0.67
VTN-201ENST00000226218 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
VTN-201ENST00000226218 ARHGAP45Q92619 1136 aa19.24■□□□□ 0.67
VTN-201ENST00000226218 SIRT2Q8IXJ6 389 aa19.23■□□□□ 0.67
VTN-201ENST00000226218 MRPL50Q8N5N7 158 aaKnown RBP19.23■□□□□ 0.67
VTN-201ENST00000226218 ZFYVE9O95405 1425 aa19.23■□□□□ 0.67
VTN-201ENST00000226218 BAG4O95429 457 aaKnown RBP19.22■□□□□ 0.67
VTN-201ENST00000226218 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
VTN-201ENST00000226218 PTPRMP28827 1452 aa19.22■□□□□ 0.67
VTN-201ENST00000226218 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
VTN-201ENST00000226218 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
VTN-201ENST00000226218 ABCC4O15439 1325 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms