RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PDE4AP27815 886 aa32.51■■■□□ 2.79
RUNDC3A-201ENST00000225441 A0A1W2PP64 1363 aa32.5■■■□□ 2.79
RUNDC3A-201ENST00000225441 PRR36Q9H6K5 1346 aa32.5■■■□□ 2.79
RUNDC3A-201ENST00000225441 POLR3AO14802 1390 aaPredicted RBP32.49■■■□□ 2.79
RUNDC3A-201ENST00000225441 TERF2IPQ9NYB0 399 aa32.49■■■□□ 2.79
RUNDC3A-201ENST00000225441 PPIP5K1Q6PFW1 1433 aa32.49■■■□□ 2.79
RUNDC3A-201ENST00000225441 NALCNQ8IZF0 1738 aa32.49■■■□□ 2.79
RUNDC3A-201ENST00000225441 CCDC61Q9Y6R9 512 aa32.48■■■□□ 2.79
RUNDC3A-201ENST00000225441 USP32Q8NFA0 1604 aa32.47■■■□□ 2.79
RUNDC3A-201ENST00000225441 AEBP2Q6ZN18 517 aaPredicted RBP32.47■■■□□ 2.79
RUNDC3A-201ENST00000225441 PLIN1O60240 522 aa32.47■■■□□ 2.79
RUNDC3A-201ENST00000225441 ADGRL3Q9HAR2 1447 aa32.45■■■□□ 2.79
RUNDC3A-201ENST00000225441 CDC42BPGQ6DT37 1551 aa32.45■■■□□ 2.79
RUNDC3A-201ENST00000225441 HDGFL2Q7Z4V5 671 aaPredicted RBP32.45■■■□□ 2.79
RUNDC3A-201ENST00000225441 TOPAZ1Q8N9V7 1692 aa32.45■■■□□ 2.79
RUNDC3A-201ENST00000225441 CENPQQ7L2Z9 268 aaPredicted RBP32.44■■■□□ 2.78
RUNDC3A-201ENST00000225441 E9PSI1 815 aa32.43■■■□□ 2.78
RUNDC3A-201ENST00000225441 KDM2BQ8NHM5 1336 aa32.43■■■□□ 2.78
RUNDC3A-201ENST00000225441 STRCP1A6NGW2 1772 aa32.42■■■□□ 2.78
RUNDC3A-201ENST00000225441 RBM33Q96EV2 1170 aaKnown RBP32.42■■■□□ 2.78
RUNDC3A-201ENST00000225441 FMN2Q9NZ56 1722 aa32.42■■■□□ 2.78
RUNDC3A-201ENST00000225441 PROSER2Q86WR7 435 aaPredicted RBP32.42■■■□□ 2.78
RUNDC3A-201ENST00000225441 PAK3O75914 559 aaPredicted RBP32.41■■■□□ 2.78
RUNDC3A-201ENST00000225441 NUTM2FA1L443 756 aa32.4■■■□□ 2.78
RUNDC3A-201ENST00000225441 ANKARQ7Z5J8 1434 aa32.4■■■□□ 2.78
RUNDC3A-201ENST00000225441 CPSF1Q10570 1443 aaKnown RBP32.39■■■□□ 2.78
RUNDC3A-201ENST00000225441 CGNL1Q0VF96 1302 aa32.39■■■□□ 2.78
RUNDC3A-201ENST00000225441 ITSN1Q15811 1721 aa32.37■■■□□ 2.77
RUNDC3A-201ENST00000225441 PLEKHG3A1L390 1219 aa32.35■■■□□ 2.77
RUNDC3A-201ENST00000225441 NCBP3Q53F19 620 aaKnown RBP32.35■■■□□ 2.77
RUNDC3A-201ENST00000225441 C14orf37Q86TY3 774 aa32.35■■■□□ 2.77
RUNDC3A-201ENST00000225441 NSD2O96028 1365 aa32.35■■■□□ 2.77
RUNDC3A-201ENST00000225441 AKAP12Q02952 1782 aa32.33■■■□□ 2.77
RUNDC3A-201ENST00000225441 APAF1O14727 1248 aa32.33■■■□□ 2.77
RUNDC3A-201ENST00000225441 C20orf194Q5TEA3 1177 aa32.32■■■□□ 2.76
RUNDC3A-201ENST00000225441 MON2Q7Z3U7 1717 aa32.32■■■□□ 2.76
RUNDC3A-201ENST00000225441 NCOA3Q9Y6Q9 1424 aa32.31■■■□□ 2.76
RUNDC3A-201ENST00000225441 RGPD8O14715 1765 aaPredicted RBP32.31■■■□□ 2.76
RUNDC3A-201ENST00000225441 TMEM94Q12767 1356 aa32.31■■■□□ 2.76
RUNDC3A-201ENST00000225441 DMRT2Q9Y5R5 561 aa32.3■■■□□ 2.76
RUNDC3A-201ENST00000225441 EDC4Q6P2E9 1401 aaKnown RBP32.3■■■□□ 2.76
RUNDC3A-201ENST00000225441 DDRGK1Q96HY6 314 aa32.3■■■□□ 2.76
RUNDC3A-201ENST00000225441 ZNF692Q9BU19 519 aaPredicted RBP32.3■■■□□ 2.76
RUNDC3A-201ENST00000225441 ACEP12821 1306 aa32.28■■■□□ 2.76
RUNDC3A-201ENST00000225441 CCDC146Q8IYE0 955 aa32.26■■■□□ 2.76
RUNDC3A-201ENST00000225441 MORC1Q86VD1 984 aa32.26■■■□□ 2.75
RUNDC3A-201ENST00000225441 PDE3AQ14432 1141 aa32.25■■■□□ 2.75
RUNDC3A-201ENST00000225441 C19orf44Q9H6X5 657 aa32.25■■■□□ 2.75
RUNDC3A-201ENST00000225441 ZNF335Q9H4Z2 1342 aaPredicted RBP32.25■■■□□ 2.75
RUNDC3A-201ENST00000225441 KIF20BQ96Q89 1820 aa32.24■■■□□ 2.75
RUNDC3A-201ENST00000225441 SHPRHQ149N8 1683 aa32.24■■■□□ 2.75
RUNDC3A-201ENST00000225441 FYB1O15117 783 aa32.23■■■□□ 2.75
RUNDC3A-201ENST00000225441 AAMPQ13685 434 aa32.23■■■□□ 2.75
RUNDC3A-201ENST00000225441 ANKRD26Q9UPS8 1709 aa32.23■■■□□ 2.75
RUNDC3A-201ENST00000225441 PMFBP1Q8TBY8 1022 aa32.23■■■□□ 2.75
RUNDC3A-201ENST00000225441 NRKQ7Z2Y5 1582 aa32.21■■■□□ 2.75
RUNDC3A-201ENST00000225441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.21■■■□□ 2.75
RUNDC3A-201ENST00000225441 USP6P35125 1406 aa32.21■■■□□ 2.75
RUNDC3A-201ENST00000225441 RUNDC1Q96C34 613 aa32.21■■■□□ 2.75
RUNDC3A-201ENST00000225441 GGNBP2Q9H3C7 697 aa32.21■■■□□ 2.75
RUNDC3A-201ENST00000225441 DCCP43146 1447 aa32.2■■■□□ 2.75
RUNDC3A-201ENST00000225441 LRRC7Q96NW7 1537 aa32.19■■■□□ 2.74
RUNDC3A-201ENST00000225441 NGDNQ8NEJ9 315 aaKnown RBP32.19■■■□□ 2.74
RUNDC3A-201ENST00000225441 RTL5Q5HYW3 569 aaPredicted RBP32.18■■■□□ 2.74
RUNDC3A-201ENST00000225441 WWC1Q8IX03 1113 aa32.18■■■□□ 2.74
RUNDC3A-201ENST00000225441 CFAP53Q96M91 514 aa32.18■■■□□ 2.74
RUNDC3A-201ENST00000225441 CCDC27Q2M243 656 aa32.17■■■□□ 2.74
RUNDC3A-201ENST00000225441 PHF23Q9BUL5 403 aaPredicted RBP32.17■■■□□ 2.74
RUNDC3A-201ENST00000225441 SPINK5Q9NQ38 1064 aaPredicted RBP32.17■■■□□ 2.74
RUNDC3A-201ENST00000225441 USP35Q9P2H5 1018 aa32.17■■■□□ 2.74
RUNDC3A-201ENST00000225441 WDR63Q8IWG1 891 aa32.16■■■□□ 2.74
RUNDC3A-201ENST00000225441 XIRP1Q702N8 1843 aaKnown RBP32.16■■■□□ 2.74
RUNDC3A-201ENST00000225441 IQSEC2Q5JU85 1478 aa32.16■■■□□ 2.74
RUNDC3A-201ENST00000225441 PHF8Q9UPP1 1060 aa32.16■■■□□ 2.74
RUNDC3A-201ENST00000225441 FAM161AQ3B820 660 aa32.15■■■□□ 2.74
RUNDC3A-201ENST00000225441 NPM2Q86SE8 214 aaKnown RBP32.15■■■□□ 2.74
RUNDC3A-201ENST00000225441 SSH2Q76I76 1423 aa32.15■■■□□ 2.74
RUNDC3A-201ENST00000225441 TTC21BQ7Z4L5 1316 aa32.15■■■□□ 2.74
RUNDC3A-201ENST00000225441 DEKP35659 375 aaKnown RBP32.14■■■□□ 2.74
RUNDC3A-201ENST00000225441 MSH6P52701 1360 aa32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 PPM1GO15355 546 aaPredicted RBP32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 ATF3P18847 181 aa32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 TNNT2P45379 298 aaPredicted RBP32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 NME9Q86XW9 330 aa32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 BCL11AQ9H165 835 aa32.13■■■□□ 2.73
RUNDC3A-201ENST00000225441 ESCO1Q5FWF5 840 aa32.12■■■□□ 2.73
RUNDC3A-201ENST00000225441 C1orf167Q5SNV9 1468 aa32.12■■■□□ 2.73
RUNDC3A-201ENST00000225441 MST1RQ04912 1400 aa32.1■■■□□ 2.73
RUNDC3A-201ENST00000225441 NBR1Q14596 966 aa32.1■■■□□ 2.73
RUNDC3A-201ENST00000225441 CADPS2Q86UW7 1296 aa32.09■■■□□ 2.73
RUNDC3A-201ENST00000225441 TTC21AQ8NDW8 1320 aa32.08■■■□□ 2.73
RUNDC3A-201ENST00000225441 BCAR3O75815 825 aa32.07■■■□□ 2.72
RUNDC3A-201ENST00000225441 ORAI2Q96SN7 254 aa32.07■■■□□ 2.72
RUNDC3A-201ENST00000225441 ZRANB1Q9UGI0 708 aa32.05■■■□□ 2.72
RUNDC3A-201ENST00000225441 KIF1AQ12756 1690 aa32.05■■■□□ 2.72
RUNDC3A-201ENST00000225441 COG3Q96JB2 828 aa32.04■■■□□ 2.72
RUNDC3A-201ENST00000225441 TCP11L2Q8N4U5 519 aa32.03■■■□□ 2.72
RUNDC3A-201ENST00000225441 MTHFSP49914 203 aa32.02■■■□□ 2.72
RUNDC3A-201ENST00000225441 C8orf34Q49A92 452 aa32.01■■■□□ 2.72
RUNDC3A-201ENST00000225441 OVOS2A0A0J9YW53 1432 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms