RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 U2AF1L5P0DN76 240 aaPredicted RBP23.1■■□□□ 1.29
GCDH-201ENST00000222214 U2AF1Q01081 240 aaKnown RBP eCLIP23.1■■□□□ 1.29
GCDH-201ENST00000222214 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
GCDH-201ENST00000222214 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
GCDH-201ENST00000222214 TOPAZ1Q8N9V7 1692 aa23.1■■□□□ 1.29
GCDH-201ENST00000222214 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
GCDH-201ENST00000222214 SLC26A8Q96RN1 970 aa23.09■■□□□ 1.29
GCDH-201ENST00000222214 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
GCDH-201ENST00000222214 PIK3R4Q99570 1358 aa23.09■■□□□ 1.29
GCDH-201ENST00000222214 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
GCDH-201ENST00000222214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.07■■□□□ 1.28
GCDH-201ENST00000222214 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
GCDH-201ENST00000222214 ADAMTSL3P82987 1691 aa23.07■■□□□ 1.28
GCDH-201ENST00000222214 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
GCDH-201ENST00000222214 AMOTL2Q9Y2J4 779 aa23.07■■□□□ 1.28
GCDH-201ENST00000222214 AATKQ6ZMQ8 1374 aa23.06■■□□□ 1.28
GCDH-201ENST00000222214 XRN1Q8IZH2 1706 aaKnown RBP23.06■■□□□ 1.28
GCDH-201ENST00000222214 DIAPH1O60610 1272 aaKnown RBP23.05■■□□□ 1.28
GCDH-201ENST00000222214 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
GCDH-201ENST00000222214 PLEKHG3A1L390 1219 aa23.04■■□□□ 1.28
GCDH-201ENST00000222214 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
GCDH-201ENST00000222214 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
GCDH-201ENST00000222214 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
GCDH-201ENST00000222214 MAP2P11137 1827 aaKnown RBP23.02■■□□□ 1.28
GCDH-201ENST00000222214 NRKQ7Z2Y5 1582 aa23.02■■□□□ 1.27
GCDH-201ENST00000222214 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
GCDH-201ENST00000222214 COG3Q96JB2 828 aa23.01■■□□□ 1.27
GCDH-201ENST00000222214 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
GCDH-201ENST00000222214 CDK12Q9NYV4 1490 aaPredicted RBP23.01■■□□□ 1.27
GCDH-201ENST00000222214 SETD1BQ9UPS6 1966 aaKnown RBP23.01■■□□□ 1.27
GCDH-201ENST00000222214 MAPK8IP3Q9UPT6 1336 aa23■■□□□ 1.27
GCDH-201ENST00000222214 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
GCDH-201ENST00000222214 NME9Q86XW9 330 aa22.99■■□□□ 1.27
GCDH-201ENST00000222214 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
GCDH-201ENST00000222214 PLIN1O60240 522 aa22.98■■□□□ 1.27
GCDH-201ENST00000222214 FCHSD2O94868 740 aa22.98■■□□□ 1.27
GCDH-201ENST00000222214 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
GCDH-201ENST00000222214 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
GCDH-201ENST00000222214 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
GCDH-201ENST00000222214 DMRT2Q9Y5R5 561 aa22.97■■□□□ 1.27
GCDH-201ENST00000222214 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
GCDH-201ENST00000222214 USP6P35125 1406 aa22.96■■□□□ 1.27
GCDH-201ENST00000222214 ACEP12821 1306 aa22.96■■□□□ 1.27
GCDH-201ENST00000222214 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
GCDH-201ENST00000222214 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
GCDH-201ENST00000222214 NEFMP07197 916 aa22.94■■□□□ 1.26
GCDH-201ENST00000222214 TMPOP42166 694 aaKnown RBP22.94■■□□□ 1.26
GCDH-201ENST00000222214 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
GCDH-201ENST00000222214 IL16Q14005 1332 aa22.92■■□□□ 1.26
GCDH-201ENST00000222214 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
GCDH-201ENST00000222214 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
GCDH-201ENST00000222214 RBM19Q9Y4C8 960 aaKnown RBP22.91■■□□□ 1.26
GCDH-201ENST00000222214 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
GCDH-201ENST00000222214 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
GCDH-201ENST00000222214 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
GCDH-201ENST00000222214 LRRC7Q96NW7 1537 aa22.91■■□□□ 1.26
GCDH-201ENST00000222214 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
GCDH-201ENST00000222214 SSH2Q76I76 1423 aa22.9■■□□□ 1.26
GCDH-201ENST00000222214 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
GCDH-201ENST00000222214 EMILIN1Q9Y6C2 1016 aa22.89■■□□□ 1.26
GCDH-201ENST00000222214 KCNA6P17658 529 aa22.89■■□□□ 1.25
GCDH-201ENST00000222214 IL13P35225 146 aa22.88■■□□□ 1.25
GCDH-201ENST00000222214 RSPH6AQ9H0K4 717 aa22.88■■□□□ 1.25
GCDH-201ENST00000222214 FMN2Q9NZ56 1722 aa22.88■■□□□ 1.25
GCDH-201ENST00000222214 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
GCDH-201ENST00000222214 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
GCDH-201ENST00000222214 C20orf194Q5TEA3 1177 aa22.87■■□□□ 1.25
GCDH-201ENST00000222214 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
GCDH-201ENST00000222214 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
GCDH-201ENST00000222214 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
GCDH-201ENST00000222214 BCAR3O75815 825 aa22.85■■□□□ 1.25
GCDH-201ENST00000222214 FBLN1P23142 703 aa22.85■■□□□ 1.25
GCDH-201ENST00000222214 RIPK4P57078 832 aa22.85■■□□□ 1.25
GCDH-201ENST00000222214 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
GCDH-201ENST00000222214 PRKAR2BP31323 418 aa22.83■■□□□ 1.25
GCDH-201ENST00000222214 RARSP54136 660 aaKnown RBP22.83■■□□□ 1.24
GCDH-201ENST00000222214 NGDNQ8NEJ9 315 aaKnown RBP22.83■■□□□ 1.24
GCDH-201ENST00000222214 RRS1Q15050 365 aaKnown RBP22.81■■□□□ 1.24
GCDH-201ENST00000222214 CALD1Q05682 793 aaKnown RBP22.81■■□□□ 1.24
GCDH-201ENST00000222214 NFE2L2Q16236 605 aa22.8■■□□□ 1.24
GCDH-201ENST00000222214 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
GCDH-201ENST00000222214 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
GCDH-201ENST00000222214 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
GCDH-201ENST00000222214 AAMPQ13685 434 aa22.8■■□□□ 1.24
GCDH-201ENST00000222214 PMFBP1Q8TBY8 1022 aa22.79■■□□□ 1.24
GCDH-201ENST00000222214 LMOD3Q0VAK6 560 aa22.78■■□□□ 1.24
GCDH-201ENST00000222214 USP54Q70EL1 1684 aa22.77■■□□□ 1.24
GCDH-201ENST00000222214 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
GCDH-201ENST00000222214 HMOX1P09601 288 aa22.76■■□□□ 1.23
GCDH-201ENST00000222214 CENPQQ7L2Z9 268 aaPredicted RBP22.76■■□□□ 1.23
GCDH-201ENST00000222214 ADGRL3Q9HAR2 1447 aa22.75■■□□□ 1.23
GCDH-201ENST00000222214 PIK3C2AO00443 1686 aa22.75■■□□□ 1.23
GCDH-201ENST00000222214 KDM2BQ8NHM5 1336 aa22.74■■□□□ 1.23
GCDH-201ENST00000222214 MS4A1P11836 297 aa22.73■■□□□ 1.23
GCDH-201ENST00000222214 KIF24Q5T7B8 1368 aa22.73■■□□□ 1.23
GCDH-201ENST00000222214 PEAK1Q9H792 1746 aa22.73■■□□□ 1.23
GCDH-201ENST00000222214 EIF4A2Q14240 407 aaKnown RBP22.72■■□□□ 1.23
GCDH-201ENST00000222214 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
GCDH-201ENST00000222214 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
GCDH-201ENST00000222214 SBNO1A3KN83 1393 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms