RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 ABCC3O15438 1527 aa23.4■■□□□ 1.34
CACTIN-201ENST00000221899 CAMSAP1Q5T5Y3 1602 aa23.4■■□□□ 1.34
CACTIN-201ENST00000221899 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
CACTIN-201ENST00000221899 FAM43AQ8N2R8 423 aa23.4■■□□□ 1.34
CACTIN-201ENST00000221899 POGZQ7Z3K3 1410 aa23.39■■□□□ 1.34
CACTIN-201ENST00000221899 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.34
CACTIN-201ENST00000221899 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.34
CACTIN-201ENST00000221899 ABCC11Q96J66 1382 aa23.39■■□□□ 1.33
CACTIN-201ENST00000221899 HECW2Q9P2P5 1572 aa23.38■■□□□ 1.33
CACTIN-201ENST00000221899 SIGLEC1Q9BZZ2 1709 aa23.38■■□□□ 1.33
CACTIN-201ENST00000221899 FYB1O15117 783 aa23.37■■□□□ 1.33
CACTIN-201ENST00000221899 EIF5BO60841 1220 aaKnown RBP23.37■■□□□ 1.33
CACTIN-201ENST00000221899 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
CACTIN-201ENST00000221899 MCM4P33991 863 aa23.36■■□□□ 1.33
CACTIN-201ENST00000221899 NEXMIFQ5QGS0 1516 aa23.36■■□□□ 1.33
CACTIN-201ENST00000221899 IDI1Q13907 227 aa23.36■■□□□ 1.33
CACTIN-201ENST00000221899 L1TD1Q5T7N2 865 aaKnown RBP23.35■■□□□ 1.33
CACTIN-201ENST00000221899 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
CACTIN-201ENST00000221899 SMC5Q8IY18 1101 aa23.35■■□□□ 1.33
CACTIN-201ENST00000221899 COL3A1P02461 1466 aaPredicted RBP23.35■■□□□ 1.33
CACTIN-201ENST00000221899 LNPKQ9C0E8 428 aa23.35■■□□□ 1.33
CACTIN-201ENST00000221899 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
CACTIN-201ENST00000221899 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
CACTIN-201ENST00000221899 FBLN1P23142 703 aa23.33■■□□□ 1.33
CACTIN-201ENST00000221899 PRAM1Q96QH2 718 aa23.33■■□□□ 1.33
CACTIN-201ENST00000221899 CHMP5Q9NZZ3 219 aa23.33■■□□□ 1.33
CACTIN-201ENST00000221899 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
CACTIN-201ENST00000221899 HSCBQ8IWL3 235 aa23.32■■□□□ 1.32
CACTIN-201ENST00000221899 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
CACTIN-201ENST00000221899 KIF16BQ96L93 1317 aa23.3■■□□□ 1.32
CACTIN-201ENST00000221899 GOLGA6L3A6NEY3 463 aa23.3■■□□□ 1.32
CACTIN-201ENST00000221899 RRAGDQ9NQL2 400 aaPredicted RBP23.3■■□□□ 1.32
CACTIN-201ENST00000221899 IL16Q14005 1332 aa23.3■■□□□ 1.32
CACTIN-201ENST00000221899 XRCC6P12956 609 aaKnown RBP eCLIP23.29■■□□□ 1.32
CACTIN-201ENST00000221899 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
CACTIN-201ENST00000221899 PANK2Q9BZ23 570 aa23.29■■□□□ 1.32
CACTIN-201ENST00000221899 NUCB1Q02818 461 aa23.28■■□□□ 1.32
CACTIN-201ENST00000221899 TRAK2O60296 914 aa23.27■■□□□ 1.32
CACTIN-201ENST00000221899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.27■■□□□ 1.32
CACTIN-201ENST00000221899 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
CACTIN-201ENST00000221899 C1orf115Q9H7X2 142 aa23.27■■□□□ 1.32
CACTIN-201ENST00000221899 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
CACTIN-201ENST00000221899 PIK3C2BO00750 1634 aa23.27■■□□□ 1.32
CACTIN-201ENST00000221899 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
CACTIN-201ENST00000221899 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
CACTIN-201ENST00000221899 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
CACTIN-201ENST00000221899 CHD1LQ86WJ1 897 aa23.25■■□□□ 1.31
CACTIN-201ENST00000221899 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
CACTIN-201ENST00000221899 HMOX1P09601 288 aa23.24■■□□□ 1.31
CACTIN-201ENST00000221899 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
CACTIN-201ENST00000221899 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
CACTIN-201ENST00000221899 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
CACTIN-201ENST00000221899 PTPRMP28827 1452 aa23.23■■□□□ 1.31
CACTIN-201ENST00000221899 FSD2A1L4K1 749 aa23.23■■□□□ 1.31
CACTIN-201ENST00000221899 ANKRD45Q5TZF3 282 aa23.23■■□□□ 1.31
CACTIN-201ENST00000221899 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
CACTIN-201ENST00000221899 PHACTR3Q96KR7 559 aa23.21■■□□□ 1.31
CACTIN-201ENST00000221899 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
CACTIN-201ENST00000221899 FOXD4L1Q9NU39 408 aa23.21■■□□□ 1.31
CACTIN-201ENST00000221899 MYO5BQ9ULV0 1848 aa23.2■■□□□ 1.31
CACTIN-201ENST00000221899 RBM25P49756 843 aaKnown RBP23.2■■□□□ 1.3
CACTIN-201ENST00000221899 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
CACTIN-201ENST00000221899 CFAP74Q9C0B2 1584 aa23.2■■□□□ 1.3
CACTIN-201ENST00000221899 FCHSD2O94868 740 aa23.2■■□□□ 1.3
CACTIN-201ENST00000221899 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
CACTIN-201ENST00000221899 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
CACTIN-201ENST00000221899 YTHDC2Q9H6S0 1430 aaKnown RBP23.19■■□□□ 1.3
CACTIN-201ENST00000221899 PNPLA6Q8IY17 1366 aa23.19■■□□□ 1.3
CACTIN-201ENST00000221899 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
CACTIN-201ENST00000221899 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
CACTIN-201ENST00000221899 ANKRD26Q9UPS8 1709 aa23.18■■□□□ 1.3
CACTIN-201ENST00000221899 POLKQ9UBT6 870 aa23.18■■□□□ 1.3
CACTIN-201ENST00000221899 PPIP5K1Q6PFW1 1433 aa23.17■■□□□ 1.3
CACTIN-201ENST00000221899 ZBTB7BO15156 539 aaPredicted RBP23.17■■□□□ 1.3
CACTIN-201ENST00000221899 MED14O60244 1454 aa23.17■■□□□ 1.3
CACTIN-201ENST00000221899 FBXO31Q5XUX0 539 aaPredicted RBP23.16■■□□□ 1.3
CACTIN-201ENST00000221899 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
CACTIN-201ENST00000221899 VAMP4O75379 141 aa23.16■■□□□ 1.3
CACTIN-201ENST00000221899 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
CACTIN-201ENST00000221899 DDX11L8A8MPP1 907 aa23.15■■□□□ 1.3
CACTIN-201ENST00000221899 CD2BP2O95400 341 aaKnown RBP23.15■■□□□ 1.3
CACTIN-201ENST00000221899 TNPO1Q92973 898 aaKnown RBP23.15■■□□□ 1.3
CACTIN-201ENST00000221899 DIP2CQ9Y2E4 1556 aa23.15■■□□□ 1.3
CACTIN-201ENST00000221899 DDIT3P35638 169 aa23.15■■□□□ 1.3
CACTIN-201ENST00000221899 MRPL50Q8N5N7 158 aaKnown RBP23.15■■□□□ 1.3
CACTIN-201ENST00000221899 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.3
CACTIN-201ENST00000221899 SNX21Q969T3 373 aa23.14■■□□□ 1.3
CACTIN-201ENST00000221899 FAM135BQ49AJ0 1406 aa23.14■■□□□ 1.29
CACTIN-201ENST00000221899 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
CACTIN-201ENST00000221899 EMILIN1Q9Y6C2 1016 aa23.14■■□□□ 1.29
CACTIN-201ENST00000221899 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
CACTIN-201ENST00000221899 WAPLQ7Z5K2 1190 aa23.13■■□□□ 1.29
CACTIN-201ENST00000221899 KIF2CQ99661 725 aa23.13■■□□□ 1.29
CACTIN-201ENST00000221899 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
CACTIN-201ENST00000221899 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
CACTIN-201ENST00000221899 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
CACTIN-201ENST00000221899 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
CACTIN-201ENST00000221899 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
CACTIN-201ENST00000221899 YEATS2Q9ULM3 1422 aa23.12■■□□□ 1.29
CACTIN-201ENST00000221899 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms