RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 RGS17Q9UGC6 210 aaPredicted RBP22.43■■□□□ 1.18
EBI3-201ENST00000221847 USP6P35125 1406 aa22.42■■□□□ 1.18
EBI3-201ENST00000221847 C8orf37Q96NL8 207 aa22.41■■□□□ 1.18
EBI3-201ENST00000221847 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
EBI3-201ENST00000221847 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
EBI3-201ENST00000221847 NUTM2GQ5VZR2 741 aa22.4■■□□□ 1.18
EBI3-201ENST00000221847 HAP1P54257 671 aaPredicted RBP22.39■■□□□ 1.17
EBI3-201ENST00000221847 ABTB2Q8N961 1025 aa22.39■■□□□ 1.17
EBI3-201ENST00000221847 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
EBI3-201ENST00000221847 AKAP12Q02952 1782 aa22.38■■□□□ 1.17
EBI3-201ENST00000221847 CDCA8Q53HL2 280 aa22.38■■□□□ 1.17
EBI3-201ENST00000221847 CD163L1Q9NR16 1453 aa22.38■■□□□ 1.17
EBI3-201ENST00000221847 SSH2Q76I76 1423 aa22.38■■□□□ 1.17
EBI3-201ENST00000221847 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
EBI3-201ENST00000221847 NGLY1Q96IV0 654 aa22.37■■□□□ 1.17
EBI3-201ENST00000221847 HDGFL2Q7Z4V5 671 aaPredicted RBP22.36■■□□□ 1.17
EBI3-201ENST00000221847 AFF2P51816 1311 aa22.35■■□□□ 1.17
EBI3-201ENST00000221847 TTC21BQ7Z4L5 1316 aa22.35■■□□□ 1.17
EBI3-201ENST00000221847 TERF2IPQ9NYB0 399 aa22.35■■□□□ 1.17
EBI3-201ENST00000221847 NINLQ9Y2I6 1382 aa22.34■■□□□ 1.17
EBI3-201ENST00000221847 ABCA3Q99758 1704 aa22.34■■□□□ 1.17
EBI3-201ENST00000221847 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
EBI3-201ENST00000221847 A0A1W2PP64 1363 aa22.33■■□□□ 1.17
EBI3-201ENST00000221847 ILDR2Q71H61 639 aa22.32■■□□□ 1.16
EBI3-201ENST00000221847 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
EBI3-201ENST00000221847 MON2Q7Z3U7 1717 aa22.31■■□□□ 1.16
EBI3-201ENST00000221847 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
EBI3-201ENST00000221847 NLRP6P59044 892 aa22.31■■□□□ 1.16
EBI3-201ENST00000221847 ZNF772Q68DY9 489 aaPredicted RBP22.31■■□□□ 1.16
EBI3-201ENST00000221847 NLRP13Q86W25 1043 aa22.31■■□□□ 1.16
EBI3-201ENST00000221847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.31■■□□□ 1.16
EBI3-201ENST00000221847 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
EBI3-201ENST00000221847 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
EBI3-201ENST00000221847 CRYBG1Q9Y4K1 1723 aa22.3■■□□□ 1.16
EBI3-201ENST00000221847 NRKQ7Z2Y5 1582 aa22.29■■□□□ 1.16
EBI3-201ENST00000221847 C11orf95C9JLR9 678 aaPredicted RBP22.29■■□□□ 1.16
EBI3-201ENST00000221847 PIK3C2AO00443 1686 aa22.29■■□□□ 1.16
EBI3-201ENST00000221847 USP19O94966 1318 aa22.29■■□□□ 1.16
EBI3-201ENST00000221847 ANKRD36BQ8N2N9 1353 aa22.28■■□□□ 1.16
EBI3-201ENST00000221847 FAM83GA6ND36 823 aa22.28■■□□□ 1.16
EBI3-201ENST00000221847 USP21Q9UK80 565 aa22.28■■□□□ 1.16
EBI3-201ENST00000221847 EDC4Q6P2E9 1401 aaKnown RBP22.27■■□□□ 1.16
EBI3-201ENST00000221847 ZRANB1Q9UGI0 708 aa22.27■■□□□ 1.16
EBI3-201ENST00000221847 ZC3H6P61129 1189 aaKnown RBP22.26■■□□□ 1.15
EBI3-201ENST00000221847 NME9Q86XW9 330 aa22.26■■□□□ 1.15
EBI3-201ENST00000221847 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
EBI3-201ENST00000221847 GCP02774 474 aa22.25■■□□□ 1.15
EBI3-201ENST00000221847 MYOM1P52179 1685 aa22.24■■□□□ 1.15
EBI3-201ENST00000221847 QTRT2Q9H974 415 aaKnown RBP22.24■■□□□ 1.15
EBI3-201ENST00000221847 KIAA0232Q92628 1395 aa22.24■■□□□ 1.15
EBI3-201ENST00000221847 BCL9LQ86UU0 1499 aa22.23■■□□□ 1.15
EBI3-201ENST00000221847 SLIT2O94813 1529 aa22.23■■□□□ 1.15
EBI3-201ENST00000221847 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
EBI3-201ENST00000221847 CHRNA2Q15822 529 aa22.22■■□□□ 1.15
EBI3-201ENST00000221847 UNC5CLQ8IV45 518 aa22.21■■□□□ 1.15
EBI3-201ENST00000221847 USP31Q70CQ4 1352 aa22.21■■□□□ 1.15
EBI3-201ENST00000221847 SLIT3O75094 1523 aa22.21■■□□□ 1.15
EBI3-201ENST00000221847 CARD14Q9BXL6 1004 aa22.2■■□□□ 1.14
EBI3-201ENST00000221847 SOX12O15370 315 aa22.19■■□□□ 1.14
EBI3-201ENST00000221847 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
EBI3-201ENST00000221847 TRPC5Q9UL62 973 aaPredicted RBP22.19■■□□□ 1.14
EBI3-201ENST00000221847 KIF7Q2M1P5 1343 aa22.19■■□□□ 1.14
EBI3-201ENST00000221847 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
EBI3-201ENST00000221847 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
EBI3-201ENST00000221847 ATRNO75882 1429 aa22.18■■□□□ 1.14
EBI3-201ENST00000221847 CPDO75976 1380 aa22.18■■□□□ 1.14
EBI3-201ENST00000221847 RXRBP28702 533 aa22.18■■□□□ 1.14
EBI3-201ENST00000221847 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
EBI3-201ENST00000221847 KCNH5Q8NCM2 988 aa22.17■■□□□ 1.14
EBI3-201ENST00000221847 NWD2Q9ULI1 1742 aa22.15■■□□□ 1.14
EBI3-201ENST00000221847 FYB1O15117 783 aa22.15■■□□□ 1.14
EBI3-201ENST00000221847 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
EBI3-201ENST00000221847 PANK3Q9H999 370 aa22.15■■□□□ 1.14
EBI3-201ENST00000221847 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.14
EBI3-201ENST00000221847 USP54Q70EL1 1684 aa22.14■■□□□ 1.14
EBI3-201ENST00000221847 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.13
EBI3-201ENST00000221847 OVOS2A0A0J9YW53 1432 aa22.14■■□□□ 1.13
EBI3-201ENST00000221847 OVOS2Q6IE36 1432 aa22.14■■□□□ 1.13
EBI3-201ENST00000221847 ARHGEF25Q86VW2 580 aa22.13■■□□□ 1.13
EBI3-201ENST00000221847 COG3Q96JB2 828 aa22.13■■□□□ 1.13
EBI3-201ENST00000221847 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
EBI3-201ENST00000221847 NFAT5O94916 1531 aa22.12■■□□□ 1.13
EBI3-201ENST00000221847 VPS72Q15906 364 aa22.12■■□□□ 1.13
EBI3-201ENST00000221847 GJD4Q96KN9 370 aaPredicted RBP22.12■■□□□ 1.13
EBI3-201ENST00000221847 NRAPQ86VF7 1730 aa22.11■■□□□ 1.13
EBI3-201ENST00000221847 CCDC9Q9Y3X0 531 aaKnown RBP22.11■■□□□ 1.13
EBI3-201ENST00000221847 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
EBI3-201ENST00000221847 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
EBI3-201ENST00000221847 ZEB1P37275 1124 aaPredicted RBP22.1■■□□□ 1.13
EBI3-201ENST00000221847 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
EBI3-201ENST00000221847 CAMTA1Q9Y6Y1 1673 aa22.1■■□□□ 1.13
EBI3-201ENST00000221847 AATKQ6ZMQ8 1374 aa22.1■■□□□ 1.13
EBI3-201ENST00000221847 LMO7Q8WWI1 1683 aa22.09■■□□□ 1.13
EBI3-201ENST00000221847 EVA1CP58658 441 aa22.08■■□□□ 1.13
EBI3-201ENST00000221847 FBLN1P23142 703 aa22.07■■□□□ 1.12
EBI3-201ENST00000221847 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
EBI3-201ENST00000221847 CGNL1Q0VF96 1302 aa22.06■■□□□ 1.12
EBI3-201ENST00000221847 KIF20BQ96Q89 1820 aa22.06■■□□□ 1.12
EBI3-201ENST00000221847 CDK12Q9NYV4 1490 aaPredicted RBP22.06■■□□□ 1.12
EBI3-201ENST00000221847 GLI3P10071 1580 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms