RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 PANK3Q9H999 370 aa26.87■■□□□ 1.89
SNAPC2-201ENST00000221573 EDC4Q6P2E9 1401 aaKnown RBP26.86■■□□□ 1.89
SNAPC2-201ENST00000221573 CARD14Q9BXL6 1004 aa26.85■■□□□ 1.89
SNAPC2-201ENST00000221573 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
SNAPC2-201ENST00000221573 TNS3Q68CZ2 1445 aa26.85■■□□□ 1.89
SNAPC2-201ENST00000221573 NSD3Q9BZ95 1437 aa26.85■■□□□ 1.89
SNAPC2-201ENST00000221573 SBNO1A3KN83 1393 aa26.85■■□□□ 1.89
SNAPC2-201ENST00000221573 PAK3O75914 559 aaPredicted RBP26.84■■□□□ 1.89
SNAPC2-201ENST00000221573 KIF20BQ96Q89 1820 aa26.83■■□□□ 1.89
SNAPC2-201ENST00000221573 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
SNAPC2-201ENST00000221573 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
SNAPC2-201ENST00000221573 SPATA31A3Q5VYP0 1347 aa26.82■■□□□ 1.88
SNAPC2-201ENST00000221573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.81■■□□□ 1.88
SNAPC2-201ENST00000221573 LRRC59Q96AG4 307 aaKnown RBP26.8■■□□□ 1.88
SNAPC2-201ENST00000221573 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
SNAPC2-201ENST00000221573 SHPRHQ149N8 1683 aa26.79■■□□□ 1.88
SNAPC2-201ENST00000221573 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
SNAPC2-201ENST00000221573 LMOD2Q6P5Q4 547 aa26.79■■□□□ 1.88
SNAPC2-201ENST00000221573 TTC21AQ8NDW8 1320 aa26.77■■□□□ 1.88
SNAPC2-201ENST00000221573 COL22A1Q8NFW1 1626 aaPredicted RBP26.77■■□□□ 1.88
SNAPC2-201ENST00000221573 CRYBG1Q9Y4K1 1723 aa26.76■■□□□ 1.88
SNAPC2-201ENST00000221573 PNPLA6Q8IY17 1366 aa26.76■■□□□ 1.87
SNAPC2-201ENST00000221573 USP54Q70EL1 1684 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 NUTM2GQ5VZR2 741 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 NME9Q86XW9 330 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 ABTB2Q8N961 1025 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 ABCA3Q99758 1704 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 ARHGEF10O15013 1369 aa26.75■■□□□ 1.87
SNAPC2-201ENST00000221573 ANKRD26Q9UPS8 1709 aa26.73■■□□□ 1.87
SNAPC2-201ENST00000221573 PER1O15534 1290 aaPredicted RBP26.73■■□□□ 1.87
SNAPC2-201ENST00000221573 ZRANB1Q9UGI0 708 aa26.73■■□□□ 1.87
SNAPC2-201ENST00000221573 MED1Q15648 1581 aaPredicted RBP26.73■■□□□ 1.87
SNAPC2-201ENST00000221573 PHRF1Q9P1Y6 1649 aaKnown RBP26.73■■□□□ 1.87
SNAPC2-201ENST00000221573 JCADQ9P266 1359 aa26.72■■□□□ 1.87
SNAPC2-201ENST00000221573 PLEKHG5O94827 1062 aa26.71■■□□□ 1.87
SNAPC2-201ENST00000221573 KNSTRNQ9Y448 316 aa26.71■■□□□ 1.87
SNAPC2-201ENST00000221573 CGNL1Q0VF96 1302 aa26.7■■□□□ 1.87
SNAPC2-201ENST00000221573 FYB1O15117 783 aa26.7■■□□□ 1.86
SNAPC2-201ENST00000221573 OVOS2A0A0J9YW53 1432 aa26.69■■□□□ 1.86
SNAPC2-201ENST00000221573 OVOS2Q6IE36 1432 aa26.69■■□□□ 1.86
SNAPC2-201ENST00000221573 NLRP6P59044 892 aa26.69■■□□□ 1.86
SNAPC2-201ENST00000221573 GGNBP2Q9H3C7 697 aa26.69■■□□□ 1.86
SNAPC2-201ENST00000221573 ILDR1Q86SU0 546 aaPredicted RBP26.68■■□□□ 1.86
SNAPC2-201ENST00000221573 USP31Q70CQ4 1352 aa26.68■■□□□ 1.86
SNAPC2-201ENST00000221573 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
SNAPC2-201ENST00000221573 CABLES1Q8TDN4 633 aa26.66■■□□□ 1.86
SNAPC2-201ENST00000221573 SLIT3O75094 1523 aa26.66■■□□□ 1.86
SNAPC2-201ENST00000221573 NLRP13Q86W25 1043 aa26.65■■□□□ 1.86
SNAPC2-201ENST00000221573 USP19O94966 1318 aa26.65■■□□□ 1.86
SNAPC2-201ENST00000221573 NSD2O96028 1365 aa26.62■■□□□ 1.85
SNAPC2-201ENST00000221573 CNGB1Q14028 1251 aaPredicted RBP26.62■■□□□ 1.85
SNAPC2-201ENST00000221573 COG3Q96JB2 828 aa26.62■■□□□ 1.85
SNAPC2-201ENST00000221573 CC2D1BQ5T0F9 858 aaKnown RBP26.6■■□□□ 1.85
SNAPC2-201ENST00000221573 NFAT5O94916 1531 aa26.6■■□□□ 1.85
SNAPC2-201ENST00000221573 LRP6O75581 1613 aa26.59■■□□□ 1.85
SNAPC2-201ENST00000221573 NPC1L1Q9UHC9 1359 aa26.59■■□□□ 1.85
SNAPC2-201ENST00000221573 NUTM2BA6NNL0 878 aaPredicted RBP26.59■■□□□ 1.85
SNAPC2-201ENST00000221573 NUTM2EB1AL46 878 aaPredicted RBP26.59■■□□□ 1.85
SNAPC2-201ENST00000221573 NUTM2AQ8IVF1 878 aaPredicted RBP26.59■■□□□ 1.85
SNAPC2-201ENST00000221573 SPATA31A6Q5VVP1 1343 aa26.58■■□□□ 1.85
SNAPC2-201ENST00000221573 SOX12O15370 315 aa26.58■■□□□ 1.85
SNAPC2-201ENST00000221573 LTN1O94822 1766 aa26.57■■□□□ 1.84
SNAPC2-201ENST00000221573 HAP1P54257 671 aaPredicted RBP26.57■■□□□ 1.84
SNAPC2-201ENST00000221573 GCP02774 474 aa26.56■■□□□ 1.84
SNAPC2-201ENST00000221573 MAP2P11137 1827 aaKnown RBP26.54■■□□□ 1.84
SNAPC2-201ENST00000221573 FBLN1P23142 703 aa26.54■■□□□ 1.84
SNAPC2-201ENST00000221573 MORC1Q86VD1 984 aa26.53■■□□□ 1.84
SNAPC2-201ENST00000221573 KCNH5Q8NCM2 988 aa26.53■■□□□ 1.84
SNAPC2-201ENST00000221573 ADAMTS2O95450 1211 aa26.51■■□□□ 1.83
SNAPC2-201ENST00000221573 TNNT2P45379 298 aaPredicted RBP26.51■■□□□ 1.83
SNAPC2-201ENST00000221573 ZC3H6P61129 1189 aaKnown RBP26.51■■□□□ 1.83
SNAPC2-201ENST00000221573 KIAA0232Q92628 1395 aa26.5■■□□□ 1.83
SNAPC2-201ENST00000221573 PLCH1Q4KWH8 1693 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 COL18A1P39060 1754 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 ZBTB7CA1YPR0 619 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 CPDO75976 1380 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 PEAK1Q9H792 1746 aa26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 COL14A1Q05707 1796 aaKnown RBP26.47■■□□□ 1.83
SNAPC2-201ENST00000221573 RRS1Q15050 365 aaKnown RBP26.46■■□□□ 1.83
SNAPC2-201ENST00000221573 PARD3Q8TEW0 1356 aa26.46■■□□□ 1.83
SNAPC2-201ENST00000221573 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.83
SNAPC2-201ENST00000221573 LMO7Q8WWI1 1683 aa26.45■■□□□ 1.82
SNAPC2-201ENST00000221573 CHRNA2Q15822 529 aa26.44■■□□□ 1.82
SNAPC2-201ENST00000221573 ARHGEF25Q86VW2 580 aa26.44■■□□□ 1.82
SNAPC2-201ENST00000221573 MAP3K19Q56UN5 1328 aa26.44■■□□□ 1.82
SNAPC2-201ENST00000221573 PRDM11Q9NQV5 511 aa26.44■■□□□ 1.82
SNAPC2-201ENST00000221573 FAM83GA6ND36 823 aa26.42■■□□□ 1.82
SNAPC2-201ENST00000221573 MEX3CQ5U5Q3 659 aaKnown RBP26.42■■□□□ 1.82
SNAPC2-201ENST00000221573 EMILIN1Q9Y6C2 1016 aa26.42■■□□□ 1.82
SNAPC2-201ENST00000221573 C8orf37Q96NL8 207 aa26.41■■□□□ 1.82
SNAPC2-201ENST00000221573 POLKQ9UBT6 870 aa26.4■■□□□ 1.82
SNAPC2-201ENST00000221573 NWD2Q9ULI1 1742 aa26.39■■□□□ 1.82
SNAPC2-201ENST00000221573 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
SNAPC2-201ENST00000221573 ABCC6O95255 1503 aa26.39■■□□□ 1.81
SNAPC2-201ENST00000221573 NRAPQ86VF7 1730 aa26.39■■□□□ 1.81
SNAPC2-201ENST00000221573 PRKRIP1Q9H875 184 aaPredicted RBP26.39■■□□□ 1.81
SNAPC2-201ENST00000221573 CAMTA1Q9Y6Y1 1673 aa26.38■■□□□ 1.81
SNAPC2-201ENST00000221573 RALBP1Q15311 655 aa26.37■■□□□ 1.81
SNAPC2-201ENST00000221573 SLIT2O94813 1529 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms