RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SLC12A5Q9H2X9 1139 aa32.86■■■□□ 2.85
HOMER3-201ENST00000221222 AFF2P51816 1311 aa32.85■■■□□ 2.85
HOMER3-201ENST00000221222 XPCQ01831 940 aaPredicted RBP32.85■■■□□ 2.85
HOMER3-201ENST00000221222 MON2Q7Z3U7 1717 aa32.84■■■□□ 2.85
HOMER3-201ENST00000221222 SBNO1A3KN83 1393 aa32.84■■■□□ 2.85
HOMER3-201ENST00000221222 C8orf37Q96NL8 207 aa32.83■■■□□ 2.85
HOMER3-201ENST00000221222 ZNF692Q9BU19 519 aaPredicted RBP32.83■■■□□ 2.85
HOMER3-201ENST00000221222 USP6P35125 1406 aa32.82■■■□□ 2.84
HOMER3-201ENST00000221222 BRD4O60885 1362 aaPredicted RBP32.82■■■□□ 2.84
HOMER3-201ENST00000221222 KIF7Q2M1P5 1343 aa32.81■■■□□ 2.84
HOMER3-201ENST00000221222 ALS2Q96Q42 1657 aa32.79■■■□□ 2.84
HOMER3-201ENST00000221222 ADAMTS2O95450 1211 aa32.79■■■□□ 2.84
HOMER3-201ENST00000221222 NRKQ7Z2Y5 1582 aa32.79■■■□□ 2.84
HOMER3-201ENST00000221222 TERF2IPQ9NYB0 399 aa32.79■■■□□ 2.84
HOMER3-201ENST00000221222 SPATA31A3Q5VYP0 1347 aa32.78■■■□□ 2.84
HOMER3-201ENST00000221222 TNS3Q68CZ2 1445 aa32.78■■■□□ 2.84
HOMER3-201ENST00000221222 SSH2Q76I76 1423 aa32.78■■■□□ 2.84
HOMER3-201ENST00000221222 A0A1W2PP64 1363 aa32.78■■■□□ 2.84
HOMER3-201ENST00000221222 ANKRD36BQ8N2N9 1353 aa32.78■■■□□ 2.84
HOMER3-201ENST00000221222 RXRBP28702 533 aa32.77■■■□□ 2.84
HOMER3-201ENST00000221222 HDGFL2Q7Z4V5 671 aaPredicted RBP32.77■■■□□ 2.84
HOMER3-201ENST00000221222 POLR3GLQ9BT43 218 aa32.77■■■□□ 2.84
HOMER3-201ENST00000221222 KTN1Q86UP2 1357 aaKnown RBP32.77■■■□□ 2.84
HOMER3-201ENST00000221222 CCDC7Q96M83 1385 aa32.77■■■□□ 2.84
HOMER3-201ENST00000221222 WASHC2AQ641Q2 1341 aa32.75■■■□□ 2.83
HOMER3-201ENST00000221222 COL22A1Q8NFW1 1626 aaPredicted RBP32.74■■■□□ 2.83
HOMER3-201ENST00000221222 ARHGEF10O15013 1369 aa32.71■■■□□ 2.83
HOMER3-201ENST00000221222 EDC4Q6P2E9 1401 aaKnown RBP32.71■■■□□ 2.83
HOMER3-201ENST00000221222 PAK3O75914 559 aaPredicted RBP32.7■■■□□ 2.82
HOMER3-201ENST00000221222 NGLY1Q96IV0 654 aa32.7■■■□□ 2.82
HOMER3-201ENST00000221222 TTC21BQ7Z4L5 1316 aa32.68■■■□□ 2.82
HOMER3-201ENST00000221222 QTRT2Q9H974 415 aaKnown RBP32.67■■■□□ 2.82
HOMER3-201ENST00000221222 TTC21AQ8NDW8 1320 aa32.67■■■□□ 2.82
HOMER3-201ENST00000221222 PIK3C2AO00443 1686 aa32.66■■■□□ 2.82
HOMER3-201ENST00000221222 CRYBG1Q9Y4K1 1723 aa32.62■■■□□ 2.81
HOMER3-201ENST00000221222 LMOD2Q6P5Q4 547 aa32.62■■■□□ 2.81
HOMER3-201ENST00000221222 CDK12Q9NYV4 1490 aaPredicted RBP32.61■■■□□ 2.81
HOMER3-201ENST00000221222 ABTB2Q8N961 1025 aa32.61■■■□□ 2.81
HOMER3-201ENST00000221222 CARD14Q9BXL6 1004 aa32.61■■■□□ 2.81
HOMER3-201ENST00000221222 ABCA3Q99758 1704 aa32.61■■■□□ 2.81
HOMER3-201ENST00000221222 UPF1Q92900 1129 aaKnown RBP eCLIP32.6■■■□□ 2.81
HOMER3-201ENST00000221222 USP54Q70EL1 1684 aa32.6■■■□□ 2.81
HOMER3-201ENST00000221222 RBM6P78332 1123 aaKnown RBP32.59■■■□□ 2.81
HOMER3-201ENST00000221222 PANK3Q9H999 370 aa32.59■■■□□ 2.81
HOMER3-201ENST00000221222 RGS12O14924 1447 aa32.59■■■□□ 2.81
HOMER3-201ENST00000221222 NSD3Q9BZ95 1437 aa32.58■■■□□ 2.81
HOMER3-201ENST00000221222 MARF1Q9Y4F3 1742 aaKnown RBP32.58■■■□□ 2.81
HOMER3-201ENST00000221222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.58■■■□□ 2.81
HOMER3-201ENST00000221222 USP21Q9UK80 565 aa32.58■■■□□ 2.81
HOMER3-201ENST00000221222 KIF20BQ96Q89 1820 aa32.55■■■□□ 2.8
HOMER3-201ENST00000221222 PHRF1Q9P1Y6 1649 aaKnown RBP32.55■■■□□ 2.8
HOMER3-201ENST00000221222 USP31Q70CQ4 1352 aa32.54■■■□□ 2.8
HOMER3-201ENST00000221222 NLRP13Q86W25 1043 aa32.54■■■□□ 2.8
HOMER3-201ENST00000221222 USP19O94966 1318 aa32.53■■■□□ 2.8
HOMER3-201ENST00000221222 NLRP6P59044 892 aa32.53■■■□□ 2.8
HOMER3-201ENST00000221222 NUTM2GQ5VZR2 741 aa32.53■■■□□ 2.8
HOMER3-201ENST00000221222 NME9Q86XW9 330 aa32.53■■■□□ 2.8
HOMER3-201ENST00000221222 SLIT3O75094 1523 aa32.51■■■□□ 2.79
HOMER3-201ENST00000221222 CABLES1Q8TDN4 633 aa32.5■■■□□ 2.79
HOMER3-201ENST00000221222 FNBP4Q8N3X1 1017 aaPredicted RBP32.49■■■□□ 2.79
HOMER3-201ENST00000221222 TRPC5Q9UL62 973 aaPredicted RBP32.49■■■□□ 2.79
HOMER3-201ENST00000221222 OVOS2A0A0J9YW53 1432 aa32.49■■■□□ 2.79
HOMER3-201ENST00000221222 OVOS2Q6IE36 1432 aa32.49■■■□□ 2.79
HOMER3-201ENST00000221222 PLEKHG5O94827 1062 aa32.48■■■□□ 2.79
HOMER3-201ENST00000221222 ZNF316A6NFI3 1004 aaPredicted RBP32.47■■■□□ 2.79
HOMER3-201ENST00000221222 FYB1O15117 783 aa32.47■■■□□ 2.79
HOMER3-201ENST00000221222 CGNL1Q0VF96 1302 aa32.47■■■□□ 2.79
HOMER3-201ENST00000221222 ZRANB1Q9UGI0 708 aa32.46■■■□□ 2.79
HOMER3-201ENST00000221222 PER1O15534 1290 aaPredicted RBP32.45■■■□□ 2.79
HOMER3-201ENST00000221222 ATRNO75882 1429 aa32.45■■■□□ 2.78
HOMER3-201ENST00000221222 ANKRD26Q9UPS8 1709 aa32.44■■■□□ 2.78
HOMER3-201ENST00000221222 HAP1P54257 671 aaPredicted RBP32.43■■■□□ 2.78
HOMER3-201ENST00000221222 KNSTRNQ9Y448 316 aa32.43■■■□□ 2.78
HOMER3-201ENST00000221222 GCP02774 474 aa32.41■■■□□ 2.78
HOMER3-201ENST00000221222 COG3Q96JB2 828 aa32.41■■■□□ 2.78
HOMER3-201ENST00000221222 GGNBP2Q9H3C7 697 aa32.41■■■□□ 2.78
HOMER3-201ENST00000221222 BCL9LQ86UU0 1499 aa32.41■■■□□ 2.78
HOMER3-201ENST00000221222 NSD2O96028 1365 aa32.4■■■□□ 2.78
HOMER3-201ENST00000221222 NFAT5O94916 1531 aa32.39■■■□□ 2.78
HOMER3-201ENST00000221222 KCNH5Q8NCM2 988 aa32.39■■■□□ 2.78
HOMER3-201ENST00000221222 AMER1Q5JTC6 1135 aaPredicted RBP32.37■■■□□ 2.77
HOMER3-201ENST00000221222 CPDO75976 1380 aa32.36■■■□□ 2.77
HOMER3-201ENST00000221222 NPC1L1Q9UHC9 1359 aa32.34■■■□□ 2.77
HOMER3-201ENST00000221222 COL14A1Q05707 1796 aaKnown RBP32.33■■■□□ 2.77
HOMER3-201ENST00000221222 KIAA0232Q92628 1395 aa32.33■■■□□ 2.77
HOMER3-201ENST00000221222 DDX10Q13206 875 aaKnown RBP32.32■■■□□ 2.77
HOMER3-201ENST00000221222 ZC3H6P61129 1189 aaKnown RBP32.31■■■□□ 2.76
HOMER3-201ENST00000221222 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.3■■■□□ 2.76
HOMER3-201ENST00000221222 PLCH1Q4KWH8 1693 aa32.3■■■□□ 2.76
HOMER3-201ENST00000221222 SLIT2O94813 1529 aa32.3■■■□□ 2.76
HOMER3-201ENST00000221222 GJD4Q96KN9 370 aaPredicted RBP32.3■■■□□ 2.76
HOMER3-201ENST00000221222 LTN1O94822 1766 aa32.29■■■□□ 2.76
HOMER3-201ENST00000221222 UNC5CLQ8IV45 518 aa32.29■■■□□ 2.76
HOMER3-201ENST00000221222 FAM83GA6ND36 823 aa32.28■■■□□ 2.76
HOMER3-201ENST00000221222 PRDM11Q9NQV5 511 aa32.28■■■□□ 2.76
HOMER3-201ENST00000221222 NWD2Q9ULI1 1742 aa32.27■■■□□ 2.76
HOMER3-201ENST00000221222 SOX12O15370 315 aa32.27■■■□□ 2.76
HOMER3-201ENST00000221222 ARHGEF25Q86VW2 580 aa32.27■■■□□ 2.76
HOMER3-201ENST00000221222 LMO7Q8WWI1 1683 aa32.26■■■□□ 2.76
HOMER3-201ENST00000221222 COL18A1P39060 1754 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms