RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 NPATQ14207 1427 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 TET3O43151 1660 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 ZNF518AQ6AHZ1 1483 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
NEFM-201ENST00000221166 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 DDX11L8A8MPP1 907 aa13.95□□□□□ -0.18
NEFM-201ENST00000221166 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
NEFM-201ENST00000221166 CD109Q6YHK3 1445 aa13.94□□□□□ -0.18
NEFM-201ENST00000221166 CHMP4BQ9H444 224 aaKnown RBP13.94□□□□□ -0.18
NEFM-201ENST00000221166 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
NEFM-201ENST00000221166 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
NEFM-201ENST00000221166 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 TSPYL6Q8N831 410 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 EMILIN1Q9Y6C2 1016 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 FCHSD2O94868 740 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 NUCB1Q02818 461 aa13.93□□□□□ -0.18
NEFM-201ENST00000221166 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
NEFM-201ENST00000221166 RRAGDQ9NQL2 400 aaPredicted RBP13.93□□□□□ -0.18
NEFM-201ENST00000221166 UHRF1BP1LA0JNW5 1464 aa13.92□□□□□ -0.18
NEFM-201ENST00000221166 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
NEFM-201ENST00000221166 CEP152O94986 1710 aa13.92□□□□□ -0.18
NEFM-201ENST00000221166 NSD2O96028 1365 aa13.92□□□□□ -0.18
NEFM-201ENST00000221166 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
NEFM-201ENST00000221166 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
NEFM-201ENST00000221166 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
NEFM-201ENST00000221166 MYOM1P52179 1685 aa13.92□□□□□ -0.18
NEFM-201ENST00000221166 GNAI1P63096 354 aa13.91□□□□□ -0.18
NEFM-201ENST00000221166 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
NEFM-201ENST00000221166 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
NEFM-201ENST00000221166 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 TNPO1Q92973 898 aaKnown RBP13.9□□□□□ -0.18
NEFM-201ENST00000221166 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 FAM83GA6ND36 823 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 NFE2L2Q16236 605 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 MRE11P49959 708 aa13.9□□□□□ -0.18
NEFM-201ENST00000221166 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
NEFM-201ENST00000221166 KIF1BO60333 1816 aa13.89□□□□□ -0.19
NEFM-201ENST00000221166 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
NEFM-201ENST00000221166 NME9Q86XW9 330 aa13.89□□□□□ -0.19
NEFM-201ENST00000221166 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
NEFM-201ENST00000221166 IL16Q14005 1332 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
NEFM-201ENST00000221166 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
NEFM-201ENST00000221166 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 GRPEL1Q9HAV7 217 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 COG3Q96JB2 828 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 DDX49Q9Y6V7 483 aaKnown RBP13.88□□□□□ -0.19
NEFM-201ENST00000221166 EFCAB6Q5THR3 1501 aa13.88□□□□□ -0.19
NEFM-201ENST00000221166 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
NEFM-201ENST00000221166 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
NEFM-201ENST00000221166 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
NEFM-201ENST00000221166 VAMP4O75379 141 aa13.87□□□□□ -0.19
NEFM-201ENST00000221166 OSCARQ8IYS5 282 aa13.87□□□□□ -0.19
NEFM-201ENST00000221166 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
NEFM-201ENST00000221166 API5Q9BZZ5 524 aaKnown RBP13.87□□□□□ -0.19
NEFM-201ENST00000221166 CDC45O75419 566 aa13.86□□□□□ -0.19
NEFM-201ENST00000221166 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
NEFM-201ENST00000221166 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
NEFM-201ENST00000221166 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
NEFM-201ENST00000221166 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
NEFM-201ENST00000221166 K7ELQ4 463 aaPredicted RBP13.86□□□□□ -0.19
NEFM-201ENST00000221166 CASC1Q6TDU7 716 aa13.86□□□□□ -0.19
NEFM-201ENST00000221166 SSFA2P28290 1259 aa13.85□□□□□ -0.19
NEFM-201ENST00000221166 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
NEFM-201ENST00000221166 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
NEFM-201ENST00000221166 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
NEFM-201ENST00000221166 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
NEFM-201ENST00000221166 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
NEFM-201ENST00000221166 SMARCA5O60264 1052 aaPredicted RBP13.84□□□□□ -0.19
NEFM-201ENST00000221166 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
NEFM-201ENST00000221166 NLRP1Q9C000 1473 aa13.84□□□□□ -0.19
NEFM-201ENST00000221166 KRT24Q2M2I5 525 aa13.83□□□□□ -0.19
NEFM-201ENST00000221166 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
NEFM-201ENST00000221166 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.2
NEFM-201ENST00000221166 PPRC1Q5VV67 1664 aaKnown RBP13.83□□□□□ -0.2
NEFM-201ENST00000221166 SKOR2Q2VWA4 1001 aaPredicted RBP13.82□□□□□ -0.2
NEFM-201ENST00000221166 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
NEFM-201ENST00000221166 MIS18AQ9NYP9 233 aa13.82□□□□□ -0.2
NEFM-201ENST00000221166 GAS2L2Q8NHY3 880 aa13.82□□□□□ -0.2
NEFM-201ENST00000221166 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
NEFM-201ENST00000221166 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
NEFM-201ENST00000221166 MCM10Q7L590 875 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
NEFM-201ENST00000221166 NECTIN2Q92692 538 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 SNX21Q969T3 373 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 MROH2AA6NES4 1674 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
NEFM-201ENST00000221166 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms