RNA–Protein interactions for RNA: ENST00000220659.10

BRF2-201, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF2, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-201ENST00000220659 ADAMTSL3P82987 1691 aa16.52■□□□□ 0.24
BRF2-201ENST00000220659 RIMS1Q86UR5 1692 aaKnown RBP16.52■□□□□ 0.24
BRF2-201ENST00000220659 CCDC27Q2M243 656 aa16.52■□□□□ 0.23
BRF2-201ENST00000220659 PRR36Q9H6K5 1346 aa16.52■□□□□ 0.23
BRF2-201ENST00000220659 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.23
BRF2-201ENST00000220659 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
BRF2-201ENST00000220659 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
BRF2-201ENST00000220659 FANCIQ9NVI1 1328 aa16.51■□□□□ 0.23
BRF2-201ENST00000220659 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
BRF2-201ENST00000220659 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
BRF2-201ENST00000220659 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
BRF2-201ENST00000220659 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
BRF2-201ENST00000220659 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
BRF2-201ENST00000220659 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
BRF2-201ENST00000220659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.49■□□□□ 0.23
BRF2-201ENST00000220659 XRN1Q8IZH2 1706 aaKnown RBP16.49■□□□□ 0.23
BRF2-201ENST00000220659 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
BRF2-201ENST00000220659 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
BRF2-201ENST00000220659 ZNF142P52746 1687 aaPredicted RBP16.49■□□□□ 0.23
BRF2-201ENST00000220659 PLEKHG3A1L390 1219 aa16.49■□□□□ 0.23
BRF2-201ENST00000220659 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
BRF2-201ENST00000220659 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
BRF2-201ENST00000220659 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
BRF2-201ENST00000220659 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
BRF2-201ENST00000220659 NCKAP5LQ9HCH0 1330 aa16.47■□□□□ 0.23
BRF2-201ENST00000220659 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
BRF2-201ENST00000220659 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
BRF2-201ENST00000220659 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
BRF2-201ENST00000220659 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
BRF2-201ENST00000220659 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
BRF2-201ENST00000220659 NRKQ7Z2Y5 1582 aa16.46■□□□□ 0.22
BRF2-201ENST00000220659 NME9Q86XW9 330 aa16.45■□□□□ 0.22
BRF2-201ENST00000220659 MAP2P11137 1827 aaKnown RBP16.44■□□□□ 0.22
BRF2-201ENST00000220659 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
BRF2-201ENST00000220659 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
BRF2-201ENST00000220659 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
BRF2-201ENST00000220659 PLIN1O60240 522 aa16.43■□□□□ 0.22
BRF2-201ENST00000220659 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
BRF2-201ENST00000220659 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
BRF2-201ENST00000220659 COG3Q96JB2 828 aa16.43■□□□□ 0.22
BRF2-201ENST00000220659 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
BRF2-201ENST00000220659 ACEP12821 1306 aa16.42■□□□□ 0.22
BRF2-201ENST00000220659 USP6P35125 1406 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 MSH5O43196 834 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 FCHSD2O94868 740 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
BRF2-201ENST00000220659 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
BRF2-201ENST00000220659 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
BRF2-201ENST00000220659 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
BRF2-201ENST00000220659 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
BRF2-201ENST00000220659 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
BRF2-201ENST00000220659 OVOS2A0A0J9YW53 1432 aa16.39■□□□□ 0.21
BRF2-201ENST00000220659 OVOS2Q6IE36 1432 aa16.39■□□□□ 0.21
BRF2-201ENST00000220659 FBLN1P23142 703 aa16.39■□□□□ 0.21
BRF2-201ENST00000220659 KCNA6P17658 529 aa16.38■□□□□ 0.21
BRF2-201ENST00000220659 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
BRF2-201ENST00000220659 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
BRF2-201ENST00000220659 IL13P35225 146 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 NALCNQ8IZF0 1738 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 LRRC7Q96NW7 1537 aa16.37■□□□□ 0.21
BRF2-201ENST00000220659 IL16Q14005 1332 aa16.36■□□□□ 0.21
BRF2-201ENST00000220659 USP31Q70CQ4 1352 aa16.36■□□□□ 0.21
BRF2-201ENST00000220659 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
BRF2-201ENST00000220659 FMN2Q9NZ56 1722 aa16.35■□□□□ 0.21
BRF2-201ENST00000220659 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
BRF2-201ENST00000220659 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
BRF2-201ENST00000220659 BCAR3O75815 825 aa16.34■□□□□ 0.21
BRF2-201ENST00000220659 HSPA2P54652 639 aa16.33■□□□□ 0.21
BRF2-201ENST00000220659 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
BRF2-201ENST00000220659 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.2
BRF2-201ENST00000220659 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
BRF2-201ENST00000220659 RIPK4P57078 832 aa16.32■□□□□ 0.2
BRF2-201ENST00000220659 PDE3AQ14432 1141 aa16.32■□□□□ 0.2
BRF2-201ENST00000220659 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
BRF2-201ENST00000220659 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
BRF2-201ENST00000220659 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
BRF2-201ENST00000220659 NEFMP07197 916 aa16.3■□□□□ 0.2
BRF2-201ENST00000220659 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
BRF2-201ENST00000220659 NFE2L2Q16236 605 aa16.29■□□□□ 0.2
BRF2-201ENST00000220659 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
BRF2-201ENST00000220659 USP54Q70EL1 1684 aa16.28■□□□□ 0.2
BRF2-201ENST00000220659 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
BRF2-201ENST00000220659 PEAK1Q9H792 1746 aa16.27■□□□□ 0.2
BRF2-201ENST00000220659 PIK3C2AO00443 1686 aa16.27■□□□□ 0.19
BRF2-201ENST00000220659 HMOX1P09601 288 aa16.27■□□□□ 0.19
BRF2-201ENST00000220659 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.19
BRF2-201ENST00000220659 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.19
BRF2-201ENST00000220659 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
BRF2-201ENST00000220659 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
BRF2-201ENST00000220659 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
BRF2-201ENST00000220659 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
BRF2-201ENST00000220659 SOX12O15370 315 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms