RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 TMPOP42166 694 aaKnown RBP28.1■■■□□ 2.09
HTATSF1-201ENST00000218364 TSR2Q969E8 191 aaKnown RBP28.1■■■□□ 2.09
HTATSF1-201ENST00000218364 A0A1W2PP64 1363 aa28.1■■■□□ 2.09
HTATSF1-201ENST00000218364 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
HTATSF1-201ENST00000218364 TRIM35Q9UPQ4 493 aa28.1■■■□□ 2.09
HTATSF1-201ENST00000218364 SMC4Q9NTJ3 1288 aa28.09■■■□□ 2.09
HTATSF1-201ENST00000218364 ZFYVE9O95405 1425 aa28.09■■■□□ 2.09
HTATSF1-201ENST00000218364 TRIM27P14373 513 aa28.08■■■□□ 2.09
HTATSF1-201ENST00000218364 DDX19BQ9UMR2 479 aa28.08■■■□□ 2.09
HTATSF1-201ENST00000218364 MED14O60244 1454 aa28.08■■■□□ 2.09
HTATSF1-201ENST00000218364 SSH1Q8WYL5 1049 aa28.06■■■□□ 2.08
HTATSF1-201ENST00000218364 ATF7IPQ6VMQ6 1270 aa28.05■■■□□ 2.08
HTATSF1-201ENST00000218364 FAM43AQ8N2R8 423 aa28.05■■■□□ 2.08
HTATSF1-201ENST00000218364 ARHGAP31Q2M1Z3 1444 aa28.04■■■□□ 2.08
HTATSF1-201ENST00000218364 SMC5Q8IY18 1101 aa28.04■■■□□ 2.08
HTATSF1-201ENST00000218364 ANKRD26Q9UPS8 1709 aa28.03■■■□□ 2.08
HTATSF1-201ENST00000218364 NUTM2DQ5VT03 806 aaPredicted RBP28.03■■■□□ 2.08
HTATSF1-201ENST00000218364 C22orf23Q9BZE7 217 aa28.03■■■□□ 2.08
HTATSF1-201ENST00000218364 U2SURPO15042 1029 aaKnown RBP28.02■■■□□ 2.08
HTATSF1-201ENST00000218364 L1TD1Q5T7N2 865 aaKnown RBP28.01■■■□□ 2.07
HTATSF1-201ENST00000218364 GGNBP2Q9H3C7 697 aa28.01■■■□□ 2.07
HTATSF1-201ENST00000218364 ATAD2Q6PL18 1390 aa28■■■□□ 2.07
HTATSF1-201ENST00000218364 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
HTATSF1-201ENST00000218364 NOB1Q9ULX3 412 aaKnown RBP27.99■■■□□ 2.07
HTATSF1-201ENST00000218364 FYB1O15117 783 aa27.99■■■□□ 2.07
HTATSF1-201ENST00000218364 ZBTB40Q9NUA8 1239 aa27.99■■■□□ 2.07
HTATSF1-201ENST00000218364 CD163L1Q9NR16 1453 aa27.98■■■□□ 2.07
HTATSF1-201ENST00000218364 PTPRMP28827 1452 aa27.98■■■□□ 2.07
HTATSF1-201ENST00000218364 PNPLA6Q8IY17 1366 aa27.98■■■□□ 2.07
HTATSF1-201ENST00000218364 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
HTATSF1-201ENST00000218364 SRPK2P78362 688 aaKnown RBP27.97■■■□□ 2.07
HTATSF1-201ENST00000218364 TERF2IPQ9NYB0 399 aa27.97■■■□□ 2.07
HTATSF1-201ENST00000218364 RICTORQ6R327 1708 aa27.97■■■□□ 2.07
HTATSF1-201ENST00000218364 KIF16BQ96L93 1317 aa27.96■■■□□ 2.07
HTATSF1-201ENST00000218364 IDI1Q13907 227 aa27.96■■■□□ 2.07
HTATSF1-201ENST00000218364 SAFB2Q14151 953 aaKnown RBP eCLIP27.96■■■□□ 2.07
HTATSF1-201ENST00000218364 TMEM57Q8N5G2 664 aa27.96■■■□□ 2.07
HTATSF1-201ENST00000218364 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
HTATSF1-201ENST00000218364 MFAP1P55081 439 aaKnown RBP27.95■■■□□ 2.07
HTATSF1-201ENST00000218364 CHMP5Q9NZZ3 219 aa27.95■■■□□ 2.07
HTATSF1-201ENST00000218364 IPO8O15397 1037 aaKnown RBP27.95■■■□□ 2.06
HTATSF1-201ENST00000218364 MCM4P33991 863 aa27.95■■■□□ 2.06
HTATSF1-201ENST00000218364 RIPK4P57078 832 aa27.95■■■□□ 2.06
HTATSF1-201ENST00000218364 ALDH1L2Q3SY69 923 aa27.94■■■□□ 2.06
HTATSF1-201ENST00000218364 SLC52A1Q9NWF4 448 aa27.94■■■□□ 2.06
HTATSF1-201ENST00000218364 DIAPH1O60610 1272 aaKnown RBP27.93■■■□□ 2.06
HTATSF1-201ENST00000218364 DIP2CQ9Y2E4 1556 aa27.93■■■□□ 2.06
HTATSF1-201ENST00000218364 CDC42BPGQ6DT37 1551 aa27.92■■■□□ 2.06
HTATSF1-201ENST00000218364 STK26Q9P289 416 aa27.91■■■□□ 2.06
HTATSF1-201ENST00000218364 NUCB1Q02818 461 aa27.9■■■□□ 2.06
HTATSF1-201ENST00000218364 BRPF1P55201 1214 aaPredicted RBP27.9■■■□□ 2.06
HTATSF1-201ENST00000218364 FSD2A1L4K1 749 aa27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 RBM25P49756 843 aaKnown RBP27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 ZNF428Q96B54 188 aa27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 NCOA3Q9Y6Q9 1424 aa27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 FCHSD2O94868 740 aa27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 SPRYD3Q8NCJ5 442 aa27.88■■■□□ 2.05
HTATSF1-201ENST00000218364 PPIP5K1Q6PFW1 1433 aa27.87■■■□□ 2.05
HTATSF1-201ENST00000218364 YTHDC2Q9H6S0 1430 aaKnown RBP27.87■■■□□ 2.05
HTATSF1-201ENST00000218364 TMEM131LA2VDJ0 1609 aa27.87■■■□□ 2.05
HTATSF1-201ENST00000218364 PRAM1Q96QH2 718 aa27.86■■■□□ 2.05
HTATSF1-201ENST00000218364 MINK1Q8N4C8 1332 aaPredicted RBP27.86■■■□□ 2.05
HTATSF1-201ENST00000218364 ZNF692Q9BU19 519 aaPredicted RBP27.86■■■□□ 2.05
HTATSF1-201ENST00000218364 HDGFL2Q7Z4V5 671 aaPredicted RBP27.85■■■□□ 2.05
HTATSF1-201ENST00000218364 HSCBQ8IWL3 235 aa27.85■■■□□ 2.05
HTATSF1-201ENST00000218364 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
HTATSF1-201ENST00000218364 SNX21Q969T3 373 aa27.84■■■□□ 2.05
HTATSF1-201ENST00000218364 LRRC7Q96NW7 1537 aa27.84■■■□□ 2.05
HTATSF1-201ENST00000218364 FAM135BQ49AJ0 1406 aa27.84■■■□□ 2.05
HTATSF1-201ENST00000218364 DDIT3P35638 169 aa27.83■■■□□ 2.05
HTATSF1-201ENST00000218364 ARHGEF40Q8TER5 1519 aa27.83■■■□□ 2.05
HTATSF1-201ENST00000218364 KIF20BQ96Q89 1820 aa27.83■■■□□ 2.05
HTATSF1-201ENST00000218364 GOLGA6L3A6NEY3 463 aa27.82■■■□□ 2.04
HTATSF1-201ENST00000218364 CHD1LQ86WJ1 897 aa27.82■■■□□ 2.04
HTATSF1-201ENST00000218364 MYO5BQ9ULV0 1848 aa27.82■■■□□ 2.04
HTATSF1-201ENST00000218364 XRCC6P12956 609 aaKnown RBP eCLIP27.81■■■□□ 2.047e-6■□□□□ 8.8
HTATSF1-201ENST00000218364 RSPH6AQ9H0K4 717 aa27.81■■■□□ 2.04
HTATSF1-201ENST00000218364 PREX1Q8TCU6 1659 aa27.8■■■□□ 2.04
HTATSF1-201ENST00000218364 TRAK2O60296 914 aa27.8■■■□□ 2.04
HTATSF1-201ENST00000218364 PIK3R4Q99570 1358 aa27.8■■■□□ 2.04
HTATSF1-201ENST00000218364 BMP2KLQ5H9B9 411 aa27.79■■■□□ 2.04
HTATSF1-201ENST00000218364 ARHGAP45Q92619 1136 aa27.78■■■□□ 2.04
HTATSF1-201ENST00000218364 CDK19Q9BWU1 502 aa27.78■■■□□ 2.04
HTATSF1-201ENST00000218364 LNPKQ9C0E8 428 aa27.78■■■□□ 2.04
HTATSF1-201ENST00000218364 CHMP4BQ9H444 224 aaKnown RBP27.78■■■□□ 2.04
HTATSF1-201ENST00000218364 ZBTB7BO15156 539 aaPredicted RBP27.77■■■□□ 2.04
HTATSF1-201ENST00000218364 ALKQ9UM73 1620 aa27.77■■■□□ 2.04
HTATSF1-201ENST00000218364 PTCH1Q13635 1447 aa27.77■■■□□ 2.04
HTATSF1-201ENST00000218364 DDX11L8A8MPP1 907 aa27.77■■■□□ 2.04
HTATSF1-201ENST00000218364 GCC1Q96CN9 775 aa27.77■■■□□ 2.04
HTATSF1-201ENST00000218364 PRKAR2BP31323 418 aa27.76■■■□□ 2.03
HTATSF1-201ENST00000218364 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
HTATSF1-201ENST00000218364 MRPL50Q8N5N7 158 aaKnown RBP27.75■■■□□ 2.03
HTATSF1-201ENST00000218364 RRAGDQ9NQL2 400 aaPredicted RBP27.75■■■□□ 2.03
HTATSF1-201ENST00000218364 POLKQ9UBT6 870 aa27.75■■■□□ 2.03
HTATSF1-201ENST00000218364 VAMP4O75379 141 aa27.74■■■□□ 2.03
HTATSF1-201ENST00000218364 NFE2L2Q16236 605 aa27.73■■■□□ 2.03
HTATSF1-201ENST00000218364 CIZ1Q9ULV3 898 aaPredicted RBP27.73■■■□□ 2.03
HTATSF1-201ENST00000218364 CALD1Q05682 793 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms