RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.02
CNIH1-201ENST00000216416 USHBP1Q8N6Y0 703 aa8.71□□□□□ -1.02
CNIH1-201ENST00000216416 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
CNIH1-201ENST00000216416 CEP170BQ9Y4F5 1589 aaPredicted RBP8.7□□□□□ -1.02
CNIH1-201ENST00000216416 C20orf194Q5TEA3 1177 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 NEURL4Q96JN8 1562 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 CPS1P31327 1500 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.7□□□□□ -1.02
CNIH1-201ENST00000216416 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 TTC21BQ7Z4L5 1316 aa8.7□□□□□ -1.02
CNIH1-201ENST00000216416 SLC24A1O60721 1099 aa8.69□□□□□ -1.02
CNIH1-201ENST00000216416 PSME1Q06323 249 aa8.69□□□□□ -1.02
CNIH1-201ENST00000216416 MYO3AQ8NEV4 1616 aa8.69□□□□□ -1.02
CNIH1-201ENST00000216416 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
CNIH1-201ENST00000216416 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CNIH1-201ENST00000216416 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
CNIH1-201ENST00000216416 UTRNP46939 3433 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 BCAR3O75815 825 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 CFAP53Q96M91 514 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 TNNQ9UQP3 1299 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 DIAPH1O60610 1272 aaKnown RBP8.68□□□□□ -1.02
CNIH1-201ENST00000216416 PHF8Q9UPP1 1060 aa8.68□□□□□ -1.02
CNIH1-201ENST00000216416 SETD1AO15047 1707 aaKnown RBP8.68□□□□□ -1.02
CNIH1-201ENST00000216416 NKTRP30414 1462 aaKnown RBP8.68□□□□□ -1.02
CNIH1-201ENST00000216416 ATP7BP35670 1465 aa8.67□□□□□ -1.02
CNIH1-201ENST00000216416 SULT6B1Q6IMI4 303 aa8.67□□□□□ -1.02
CNIH1-201ENST00000216416 CLUAP1Q96AJ1 413 aa8.67□□□□□ -1.02
CNIH1-201ENST00000216416 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
CNIH1-201ENST00000216416 FRAT1Q92837 279 aaPredicted RBP8.66□□□□□ -1.02
CNIH1-201ENST00000216416 MIS18AQ9NYP9 233 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 ARHGAP23Q9P227 1491 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 EP400Q96L91 3159 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 NPHP4O75161 1426 aaPredicted RBP8.66□□□□□ -1.02
CNIH1-201ENST00000216416 AMPHP49418 695 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 GOLGA2Q08379 1002 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
CNIH1-201ENST00000216416 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 RIPK4P57078 832 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 MED14O60244 1454 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 TMEM94Q12767 1356 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
CNIH1-201ENST00000216416 LRRC59Q96AG4 307 aaKnown RBP8.65□□□□□ -1.02
CNIH1-201ENST00000216416 KRT24Q2M2I5 525 aa8.65□□□□□ -1.03
CNIH1-201ENST00000216416 ZNF428Q96B54 188 aa8.64□□□□□ -1.03
CNIH1-201ENST00000216416 SLIT1O75093 1534 aa8.64□□□□□ -1.03
CNIH1-201ENST00000216416 EIF4A2Q14240 407 aaKnown RBP8.64□□□□□ -1.03
CNIH1-201ENST00000216416 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
CNIH1-201ENST00000216416 RUNDC1Q96C34 613 aa8.64□□□□□ -1.03
CNIH1-201ENST00000216416 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
CNIH1-201ENST00000216416 ATF3P18847 181 aa8.63□□□□□ -1.03
CNIH1-201ENST00000216416 MCM10Q7L590 875 aa8.63□□□□□ -1.03
CNIH1-201ENST00000216416 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
CNIH1-201ENST00000216416 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
CNIH1-201ENST00000216416 ZNF692Q9BU19 519 aaPredicted RBP8.63□□□□□ -1.03
CNIH1-201ENST00000216416 TMPOP42166 694 aaKnown RBP8.63□□□□□ -1.03
CNIH1-201ENST00000216416 TECPR2O15040 1411 aa8.62□□□□□ -1.03
CNIH1-201ENST00000216416 DLC1Q96QB1 1528 aa8.62□□□□□ -1.03
CNIH1-201ENST00000216416 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
CNIH1-201ENST00000216416 POLR3AO14802 1390 aaPredicted RBP8.62□□□□□ -1.03
CNIH1-201ENST00000216416 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
CNIH1-201ENST00000216416 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
CNIH1-201ENST00000216416 USP6P35125 1406 aa8.62□□□□□ -1.03
CNIH1-201ENST00000216416 IL13P35225 146 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 KRT28Q7Z3Y7 464 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 SLFN5Q08AF3 891 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
CNIH1-201ENST00000216416 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 C19orf44Q9H6X5 657 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
CNIH1-201ENST00000216416 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
CNIH1-201ENST00000216416 SIRT1Q96EB6 747 aa8.6□□□□□ -1.03
CNIH1-201ENST00000216416 PLEKHF1Q96S99 279 aa8.6□□□□□ -1.03
CNIH1-201ENST00000216416 EDC4Q6P2E9 1401 aaKnown RBP8.6□□□□□ -1.03
CNIH1-201ENST00000216416 RRP1P56182 461 aaKnown RBP8.6□□□□□ -1.03
CNIH1-201ENST00000216416 EXOSC9Q06265 439 aaKnown RBP8.6□□□□□ -1.03
CNIH1-201ENST00000216416 EYA1Q99502 592 aa8.6□□□□□ -1.03
CNIH1-201ENST00000216416 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
CNIH1-201ENST00000216416 DIP2AQ14689 1571 aa8.59□□□□□ -1.03
CNIH1-201ENST00000216416 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
CNIH1-201ENST00000216416 TSPYL6Q8N831 410 aa8.59□□□□□ -1.03
CNIH1-201ENST00000216416 ZNF521Q96K83 1311 aa8.59□□□□□ -1.03
CNIH1-201ENST00000216416 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
CNIH1-201ENST00000216416 PIP4K2BP78356 416 aa8.59□□□□□ -1.03
CNIH1-201ENST00000216416 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
CNIH1-201ENST00000216416 GCP02774 474 aa8.58□□□□□ -1.04
CNIH1-201ENST00000216416 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
CNIH1-201ENST00000216416 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
CNIH1-201ENST00000216416 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
CNIH1-201ENST00000216416 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
CNIH1-201ENST00000216416 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
CNIH1-201ENST00000216416 NINLQ9Y2I6 1382 aa8.57□□□□□ -1.04
CNIH1-201ENST00000216416 NEFMP07197 916 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms