RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 BARGINQ6ZT62 677 aa7.58□□□□□ -1.2
CDKN3-201ENST00000216414 EVA1BQ9NVM1 165 aa7.58□□□□□ -1.2
CDKN3-201ENST00000216414 TLL2Q9Y6L7 1015 aa7.58□□□□□ -1.2
CDKN3-201ENST00000216414 BEGAINQ9BUH8 593 aa7.57□□□□□ -1.2
CDKN3-201ENST00000216414 SPDYE5A6NIY4 337 aa7.56□□□□□ -1.2
CDKN3-201ENST00000216414 ZMYND10O75800 440 aa7.56□□□□□ -1.2
CDKN3-201ENST00000216414 AMHR2Q16671 573 aa7.56□□□□□ -1.2
CDKN3-201ENST00000216414 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
CDKN3-201ENST00000216414 PLEKHG3A1L390 1219 aa7.55□□□□□ -1.2
CDKN3-201ENST00000216414 CTHP32929 405 aa7.55□□□□□ -1.2
CDKN3-201ENST00000216414 KCNMA1Q12791 1236 aa7.55□□□□□ -1.2
CDKN3-201ENST00000216414 ZC3H15Q8WU90 426 aaKnown RBP7.55□□□□□ -1.2
CDKN3-201ENST00000216414 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
CDKN3-201ENST00000216414 NNTQ13423 1086 aa7.54□□□□□ -1.2
CDKN3-201ENST00000216414 DESI1Q6ICB0 168 aa7.54□□□□□ -1.2
CDKN3-201ENST00000216414 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
CDKN3-201ENST00000216414 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
CDKN3-201ENST00000216414 TBC1D2Q9BYX2 928 aa7.54□□□□□ -1.2
CDKN3-201ENST00000216414 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
CDKN3-201ENST00000216414 DIXDC1Q155Q3 683 aa7.52□□□□□ -1.21
CDKN3-201ENST00000216414 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
CDKN3-201ENST00000216414 TMEM151AQ8N4L1 468 aa7.52□□□□□ -1.21
CDKN3-201ENST00000216414 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
CDKN3-201ENST00000216414 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
CDKN3-201ENST00000216414 PCDHB15Q9Y5E8 787 aa7.51□□□□□ -1.21
CDKN3-201ENST00000216414 CFAP99D6REC4 459 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 ADH1CP00326 375 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 WDR4P57081 412 aaKnown RBP7.5□□□□□ -1.21
CDKN3-201ENST00000216414 ARID5BQ14865 1188 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 LYPD8Q6UX82 237 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 FAM174AQ8TBP5 190 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 TSC1Q92574 1164 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 MAP10Q9P2G4 905 aa7.5□□□□□ -1.21
CDKN3-201ENST00000216414 TIMP2P16035 220 aa7.49□□□□□ -1.21
CDKN3-201ENST00000216414 HRCP23327 699 aa7.49□□□□□ -1.21
CDKN3-201ENST00000216414 GJA5P36382 358 aa7.49□□□□□ -1.21
CDKN3-201ENST00000216414 MPNDQ8N594 471 aa7.49□□□□□ -1.21
CDKN3-201ENST00000216414 FOXJ1Q92949 421 aa7.49□□□□□ -1.21
CDKN3-201ENST00000216414 SOBPA7XYQ1 873 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 RNF225M0QZC1 329 aaPredicted RBP7.48□□□□□ -1.21
CDKN3-201ENST00000216414 SPTLC1O15269 473 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 MAN1A2O60476 641 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 GDF11O95390 407 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 AGERQ15109 404 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
CDKN3-201ENST00000216414 TRIM66O15016 1216 aa7.47□□□□□ -1.21
CDKN3-201ENST00000216414 F12P00748 615 aaPredicted RBP7.46□□□□□ -1.22
CDKN3-201ENST00000216414 RASSF7Q02833 373 aa7.46□□□□□ -1.22
CDKN3-201ENST00000216414 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 ZIC2O95409 532 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 NUTM2DQ5VT03 806 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 PRPF38BQ5VTL8 546 aaKnown RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
CDKN3-201ENST00000216414 AK7Q96M32 723 aa7.45□□□□□ -1.22
CDKN3-201ENST00000216414 PER1O15534 1290 aaPredicted RBP7.44□□□□□ -1.22
CDKN3-201ENST00000216414 UPP2O95045 317 aa7.44□□□□□ -1.22
CDKN3-201ENST00000216414 C6orf118Q5T5N4 469 aa7.44□□□□□ -1.22
CDKN3-201ENST00000216414 CDK15Q96Q40 435 aa7.44□□□□□ -1.22
CDKN3-201ENST00000216414 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
CDKN3-201ENST00000216414 PPFIA3O75145 1194 aa7.43□□□□□ -1.22
CDKN3-201ENST00000216414 GSK3AP49840 483 aa7.43□□□□□ -1.22
CDKN3-201ENST00000216414 NR5A1Q13285 461 aa7.43□□□□□ -1.22
CDKN3-201ENST00000216414 BPHLQ86WA6 291 aaPredicted RBP7.43□□□□□ -1.22
CDKN3-201ENST00000216414 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
CDKN3-201ENST00000216414 NR3C2P08235 984 aa7.42□□□□□ -1.22
CDKN3-201ENST00000216414 QPCTQ16769 361 aa7.42□□□□□ -1.22
CDKN3-201ENST00000216414 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
CDKN3-201ENST00000216414 KLF16Q9BXK1 252 aaPredicted RBP7.42□□□□□ -1.22
CDKN3-201ENST00000216414 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
CDKN3-201ENST00000216414 BMP2P12643 396 aa7.41□□□□□ -1.22
CDKN3-201ENST00000216414 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
CDKN3-201ENST00000216414 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
CDKN3-201ENST00000216414 MAGEB6P1A0A0J9YX57 407 aa7.39□□□□□ -1.23
CDKN3-201ENST00000216414 FSHRP23945 695 aa7.39□□□□□ -1.23
CDKN3-201ENST00000216414 GRM5P41594 1212 aa7.39□□□□□ -1.23
CDKN3-201ENST00000216414 PDE4DQ08499 809 aa7.39□□□□□ -1.23
CDKN3-201ENST00000216414 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
CDKN3-201ENST00000216414 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
CDKN3-201ENST00000216414 NBPF14Q5TI25 921 aa7.38□□□□□ -1.23
CDKN3-201ENST00000216414 VASH1Q7L8A9 365 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-201ENST00000216414 LINC00528Q8N1L1 170 aa7.38□□□□□ -1.23
CDKN3-201ENST00000216414 CNTNAP3BQ96NU0 1288 aa7.38□□□□□ -1.23
CDKN3-201ENST00000216414 CNTNAP3Q9BZ76 1288 aa7.38□□□□□ -1.23
CDKN3-201ENST00000216414 LILRB3O75022 631 aa7.37□□□□□ -1.23
CDKN3-201ENST00000216414 IGHA1P01876 353 aa7.37□□□□□ -1.23
CDKN3-201ENST00000216414 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
CDKN3-201ENST00000216414 CLK2P49760 499 aaKnown RBP7.36□□□□□ -1.23
CDKN3-201ENST00000216414 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
CDKN3-201ENST00000216414 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
CDKN3-201ENST00000216414 SH3RF1Q7Z6J0 888 aa7.36□□□□□ -1.23
CDKN3-201ENST00000216414 MEIOBQ8N635 442 aa7.36□□□□□ -1.23
CDKN3-201ENST00000216414 C1QTNF2Q9BXJ5 285 aa7.36□□□□□ -1.23
CDKN3-201ENST00000216414 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
CDKN3-201ENST00000216414 SLC24A3Q9HC58 644 aa7.35□□□□□ -1.23
CDKN3-201ENST00000216414 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
CDKN3-201ENST00000216414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms