RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 CABLES1Q8TDN4 633 aa15.4■□□□□ 0.06
CDKL1-201ENST00000216378 PHLPP1O60346 1717 aa15.4■□□□□ 0.06
CDKL1-201ENST00000216378 SOS2Q07890 1332 aaPredicted RBP15.4■□□□□ 0.06
CDKL1-201ENST00000216378 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CDKL1-201ENST00000216378 PSME1Q06323 249 aa15.39■□□□□ 0.05
CDKL1-201ENST00000216378 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
CDKL1-201ENST00000216378 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
CDKL1-201ENST00000216378 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
CDKL1-201ENST00000216378 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
CDKL1-201ENST00000216378 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
CDKL1-201ENST00000216378 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
CDKL1-201ENST00000216378 POLR3AO14802 1390 aaPredicted RBP15.37■□□□□ 0.05
CDKL1-201ENST00000216378 MYOM1P52179 1685 aa15.37■□□□□ 0.05
CDKL1-201ENST00000216378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDKL1-201ENST00000216378 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
CDKL1-201ENST00000216378 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
CDKL1-201ENST00000216378 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
CDKL1-201ENST00000216378 CPSF1Q10570 1443 aaKnown RBP15.35■□□□□ 0.05
CDKL1-201ENST00000216378 FBLN1P23142 703 aa15.35■□□□□ 0.05
CDKL1-201ENST00000216378 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
CDKL1-201ENST00000216378 TRPM3Q9HCF6 1732 aaPredicted RBP15.34■□□□□ 0.05
CDKL1-201ENST00000216378 USP6P35125 1406 aa15.34■□□□□ 0.05
CDKL1-201ENST00000216378 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.05
CDKL1-201ENST00000216378 CCER2I3L3R5 266 aa15.33■□□□□ 0.05
CDKL1-201ENST00000216378 NME9Q86XW9 330 aa15.33■□□□□ 0.05
CDKL1-201ENST00000216378 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.05
CDKL1-201ENST00000216378 ITSN1Q15811 1721 aa15.33■□□□□ 0.05
CDKL1-201ENST00000216378 SSH2Q76I76 1423 aa15.33■□□□□ 0.04
CDKL1-201ENST00000216378 NUTM2BA6NNL0 878 aaPredicted RBP15.33■□□□□ 0.04
CDKL1-201ENST00000216378 NUTM2EB1AL46 878 aaPredicted RBP15.33■□□□□ 0.04
CDKL1-201ENST00000216378 NUTM2AQ8IVF1 878 aaPredicted RBP15.33■□□□□ 0.04
CDKL1-201ENST00000216378 KIF1AQ12756 1690 aa15.33■□□□□ 0.04
CDKL1-201ENST00000216378 PANK3Q9H999 370 aa15.32■□□□□ 0.04
CDKL1-201ENST00000216378 KTN1Q86UP2 1357 aaKnown RBP15.32■□□□□ 0.04
CDKL1-201ENST00000216378 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
CDKL1-201ENST00000216378 LRP6O75581 1613 aa15.31■□□□□ 0.04
CDKL1-201ENST00000216378 SOX12O15370 315 aa15.31■□□□□ 0.04
CDKL1-201ENST00000216378 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
CDKL1-201ENST00000216378 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
CDKL1-201ENST00000216378 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
CDKL1-201ENST00000216378 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
CDKL1-201ENST00000216378 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
CDKL1-201ENST00000216378 AKAP12Q02952 1782 aa15.29■□□□□ 0.04
CDKL1-201ENST00000216378 TNS3Q68CZ2 1445 aa15.29■□□□□ 0.04
CDKL1-201ENST00000216378 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDKL1-201ENST00000216378 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
CDKL1-201ENST00000216378 ADAMTS2O95450 1211 aa15.28■□□□□ 0.04
CDKL1-201ENST00000216378 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
CDKL1-201ENST00000216378 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
CDKL1-201ENST00000216378 ANKRD36BQ8N2N9 1353 aa15.28■□□□□ 0.04
CDKL1-201ENST00000216378 PIK3C2AO00443 1686 aa15.28■□□□□ 0.04
CDKL1-201ENST00000216378 GGNBP2Q9H3C7 697 aa15.27■□□□□ 0.04
CDKL1-201ENST00000216378 MED1Q15648 1581 aaPredicted RBP15.27■□□□□ 0.04
CDKL1-201ENST00000216378 JCADQ9P266 1359 aa15.27■□□□□ 0.03
CDKL1-201ENST00000216378 EP400Q96L91 3159 aa15.27■□□□□ 0.03
CDKL1-201ENST00000216378 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
CDKL1-201ENST00000216378 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
CDKL1-201ENST00000216378 SBNO1A3KN83 1393 aa15.26■□□□□ 0.03
CDKL1-201ENST00000216378 CDCA8Q53HL2 280 aa15.26■□□□□ 0.03
CDKL1-201ENST00000216378 FYB1O15117 783 aa15.25■□□□□ 0.03
CDKL1-201ENST00000216378 NLRP6P59044 892 aa15.25■□□□□ 0.03
CDKL1-201ENST00000216378 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
CDKL1-201ENST00000216378 TERF2IPQ9NYB0 399 aa15.25■□□□□ 0.03
CDKL1-201ENST00000216378 MARF1Q9Y4F3 1742 aaKnown RBP15.25■□□□□ 0.03
CDKL1-201ENST00000216378 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
CDKL1-201ENST00000216378 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
CDKL1-201ENST00000216378 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
CDKL1-201ENST00000216378 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
CDKL1-201ENST00000216378 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
CDKL1-201ENST00000216378 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
CDKL1-201ENST00000216378 SHPRHQ149N8 1683 aa15.22■□□□□ 0.03
CDKL1-201ENST00000216378 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
CDKL1-201ENST00000216378 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.03
CDKL1-201ENST00000216378 CRYBG1Q9Y4K1 1723 aa15.21■□□□□ 0.02
CDKL1-201ENST00000216378 ZBTB7CA1YPR0 619 aa15.2■□□□□ 0.02
CDKL1-201ENST00000216378 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
CDKL1-201ENST00000216378 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
CDKL1-201ENST00000216378 RGS17Q9UGC6 210 aaPredicted RBP15.2■□□□□ 0.02
CDKL1-201ENST00000216378 GCP02774 474 aa15.2■□□□□ 0.02
CDKL1-201ENST00000216378 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
CDKL1-201ENST00000216378 ABCA3Q99758 1704 aa15.19■□□□□ 0.02
CDKL1-201ENST00000216378 COL22A1Q8NFW1 1626 aaPredicted RBP15.19■□□□□ 0.02
CDKL1-201ENST00000216378 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
CDKL1-201ENST00000216378 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
CDKL1-201ENST00000216378 USP19O94966 1318 aa15.19■□□□□ 0.02
CDKL1-201ENST00000216378 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
CDKL1-201ENST00000216378 RRS1Q15050 365 aaKnown RBP15.18■□□□□ 0.02
CDKL1-201ENST00000216378 OVOS2A0A0J9YW53 1432 aa15.18■□□□□ 0.02
CDKL1-201ENST00000216378 OVOS2Q6IE36 1432 aa15.18■□□□□ 0.02
CDKL1-201ENST00000216378 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
CDKL1-201ENST00000216378 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
CDKL1-201ENST00000216378 MSH5O43196 834 aa15.17■□□□□ 0.02
CDKL1-201ENST00000216378 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
CDKL1-201ENST00000216378 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
CDKL1-201ENST00000216378 NLRP13Q86W25 1043 aa15.16■□□□□ 0.02
CDKL1-201ENST00000216378 PHRF1Q9P1Y6 1649 aaKnown RBP15.16■□□□□ 0.02
CDKL1-201ENST00000216378 RBM19Q9Y4C8 960 aaKnown RBP15.15■□□□□ 0.02
CDKL1-201ENST00000216378 USP31Q70CQ4 1352 aa15.14■□□□□ 0.01
CDKL1-201ENST00000216378 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
CDKL1-201ENST00000216378 MEX3CQ5U5Q3 659 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms