RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 MVPQ14764 893 aaKnown RBP26.55■■□□□ 1.84
STRADB-201ENST00000194530 IL16Q14005 1332 aa26.55■■□□□ 1.84
STRADB-201ENST00000194530 FBXO31Q5XUX0 539 aaPredicted RBP26.55■■□□□ 1.84
STRADB-201ENST00000194530 NLRP1Q9C000 1473 aa26.54■■□□□ 1.84
STRADB-201ENST00000194530 CDK19Q9BWU1 502 aa26.54■■□□□ 1.84
STRADB-201ENST00000194530 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
STRADB-201ENST00000194530 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
STRADB-201ENST00000194530 NFKBIBQ15653 356 aa26.53■■□□□ 1.84
STRADB-201ENST00000194530 DZIP1LQ8IYY4 767 aaKnown RBP26.53■■□□□ 1.84
STRADB-201ENST00000194530 STAG3Q9UJ98 1225 aa26.53■■□□□ 1.84
STRADB-201ENST00000194530 USP19O94966 1318 aa26.52■■□□□ 1.84
STRADB-201ENST00000194530 DIAPH1O60610 1272 aaKnown RBP26.52■■□□□ 1.84
STRADB-201ENST00000194530 FTSJ3Q8IY81 847 aaKnown RBP26.52■■□□□ 1.84
STRADB-201ENST00000194530 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
STRADB-201ENST00000194530 EXOSC9Q06265 439 aaKnown RBP26.51■■□□□ 1.84
STRADB-201ENST00000194530 PPP6R1Q9UPN7 881 aa26.51■■□□□ 1.83
STRADB-201ENST00000194530 PDZRN3Q9UPQ7 1066 aa26.51■■□□□ 1.83
STRADB-201ENST00000194530 ARHGEF40Q8TER5 1519 aa26.51■■□□□ 1.83
STRADB-201ENST00000194530 PNPLA6Q8IY17 1366 aa26.5■■□□□ 1.83
STRADB-201ENST00000194530 SMC4Q9NTJ3 1288 aa26.5■■□□□ 1.83
STRADB-201ENST00000194530 CABP1Q9NZU7 370 aa26.49■■□□□ 1.83
STRADB-201ENST00000194530 RIPK4P57078 832 aa26.48■■□□□ 1.83
STRADB-201ENST00000194530 SEC24BO95487 1268 aa26.47■■□□□ 1.83
STRADB-201ENST00000194530 SSH1Q8WYL5 1049 aa26.45■■□□□ 1.82
STRADB-201ENST00000194530 FCHSD2O94868 740 aa26.44■■□□□ 1.82
STRADB-201ENST00000194530 DLC1Q96QB1 1528 aa26.44■■□□□ 1.82
STRADB-201ENST00000194530 TRIM27P14373 513 aa26.43■■□□□ 1.82
STRADB-201ENST00000194530 ATF7IPQ6VMQ6 1270 aa26.43■■□□□ 1.82
STRADB-201ENST00000194530 DDX19BQ9UMR2 479 aa26.43■■□□□ 1.82
STRADB-201ENST00000194530 BECN1Q14457 450 aa26.42■■□□□ 1.82
STRADB-201ENST00000194530 UPF2Q9HAU5 1272 aaKnown RBP26.42■■□□□ 1.82
STRADB-201ENST00000194530 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
STRADB-201ENST00000194530 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
STRADB-201ENST00000194530 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
STRADB-201ENST00000194530 AGLP35573 1532 aa26.41■■□□□ 1.82
STRADB-201ENST00000194530 FAM69CQ0P6D2 419 aa26.4■■□□□ 1.82
STRADB-201ENST00000194530 ATP7BP35670 1465 aa26.4■■□□□ 1.82
STRADB-201ENST00000194530 HDAC1Q13547 482 aaPredicted RBP26.4■■□□□ 1.82
STRADB-201ENST00000194530 CDC42BPGQ6DT37 1551 aa26.39■■□□□ 1.82
STRADB-201ENST00000194530 A2ML1A8K2U0 1454 aa26.39■■□□□ 1.81
STRADB-201ENST00000194530 IPO8O15397 1037 aaKnown RBP26.39■■□□□ 1.81
STRADB-201ENST00000194530 NOB1Q9ULX3 412 aaKnown RBP26.39■■□□□ 1.81
STRADB-201ENST00000194530 GSE1Q14687 1217 aa26.38■■□□□ 1.81
STRADB-201ENST00000194530 ITPRIPQ8IWB1 547 aa26.37■■□□□ 1.81
STRADB-201ENST00000194530 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
STRADB-201ENST00000194530 WAPLQ7Z5K2 1190 aa26.37■■□□□ 1.81
STRADB-201ENST00000194530 POLKQ9UBT6 870 aa26.37■■□□□ 1.81
STRADB-201ENST00000194530 RIMS2Q9UQ26 1411 aa26.37■■□□□ 1.81
STRADB-201ENST00000194530 ALDH1L2Q3SY69 923 aa26.36■■□□□ 1.81
STRADB-201ENST00000194530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.36■■□□□ 1.813e-6■■■□□ 14.9
STRADB-201ENST00000194530 TBC1D32Q96NH3 1257 aa26.35■■□□□ 1.81
STRADB-201ENST00000194530 RSPH6AQ9H0K4 717 aa26.35■■□□□ 1.81
STRADB-201ENST00000194530 SPATA31D1Q6ZQQ2 1576 aa26.35■■□□□ 1.81
STRADB-201ENST00000194530 ZNF428Q96B54 188 aa26.34■■□□□ 1.81
STRADB-201ENST00000194530 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
STRADB-201ENST00000194530 PRKAR2BP31323 418 aa26.33■■□□□ 1.81
STRADB-201ENST00000194530 LRRC7Q96NW7 1537 aa26.32■■□□□ 1.8
STRADB-201ENST00000194530 TMEM57Q8N5G2 664 aa26.32■■□□□ 1.8
STRADB-201ENST00000194530 FRAT2O75474 233 aaPredicted RBP26.31■■□□□ 1.8
STRADB-201ENST00000194530 ZBTB40Q9NUA8 1239 aa26.31■■□□□ 1.8
STRADB-201ENST00000194530 DIP2BQ9P265 1576 aa26.3■■□□□ 1.8
STRADB-201ENST00000194530 BRPF1P55201 1214 aaPredicted RBP26.3■■□□□ 1.8
STRADB-201ENST00000194530 CALD1Q05682 793 aaKnown RBP26.3■■□□□ 1.8
STRADB-201ENST00000194530 SETD1AO15047 1707 aaKnown RBP26.29■■□□□ 1.8
STRADB-201ENST00000194530 NFE2L2Q16236 605 aa26.29■■□□□ 1.8
STRADB-201ENST00000194530 SMC5Q8IY18 1101 aa26.29■■□□□ 1.8
STRADB-201ENST00000194530 EDC4Q6P2E9 1401 aaKnown RBP26.29■■□□□ 1.8
STRADB-201ENST00000194530 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
STRADB-201ENST00000194530 CPSF1Q10570 1443 aaKnown RBP26.28■■□□□ 1.8
STRADB-201ENST00000194530 PPIP5K1Q6PFW1 1433 aa26.28■■□□□ 1.8
STRADB-201ENST00000194530 WASLO00401 505 aaPredicted RBP26.28■■□□□ 1.8
STRADB-201ENST00000194530 RIMBP3CA6NJZ7 1639 aa26.27■■□□□ 1.8
STRADB-201ENST00000194530 RIMBP3BA6NNM3 1639 aa26.27■■□□□ 1.8
STRADB-201ENST00000194530 RIMBP3Q9UFD9 1639 aa26.27■■□□□ 1.8
STRADB-201ENST00000194530 FBLN1P23142 703 aa26.27■■□□□ 1.8
STRADB-201ENST00000194530 MAP2P11137 1827 aaKnown RBP26.24■■□□□ 1.79
STRADB-201ENST00000194530 PHACTR3Q96KR7 559 aa26.24■■□□□ 1.79
STRADB-201ENST00000194530 IL13P35225 146 aa26.23■■□□□ 1.79
STRADB-201ENST00000194530 AATKQ6ZMQ8 1374 aa26.23■■□□□ 1.79
STRADB-201ENST00000194530 HMOX1P09601 288 aa26.23■■□□□ 1.79
STRADB-201ENST00000194530 SIRT1Q96EB6 747 aa26.23■■□□□ 1.79
STRADB-201ENST00000194530 TSPOAP1O95153 1857 aa26.23■■□□□ 1.79
STRADB-201ENST00000194530 CHMP4BQ9H444 224 aaKnown RBP26.22■■□□□ 1.79
STRADB-201ENST00000194530 GNAI1P63096 354 aa26.22■■□□□ 1.79
STRADB-201ENST00000194530 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
STRADB-201ENST00000194530 MLECQ14165 292 aa26.21■■□□□ 1.79
STRADB-201ENST00000194530 ARHGAP45Q92619 1136 aa26.21■■□□□ 1.79
STRADB-201ENST00000194530 IFT57Q9NWB7 429 aa26.21■■□□□ 1.79
STRADB-201ENST00000194530 CDK12Q9NYV4 1490 aaPredicted RBP26.21■■□□□ 1.79
STRADB-201ENST00000194530 NME9Q86XW9 330 aa26.21■■□□□ 1.79
STRADB-201ENST00000194530 VAMP4O75379 141 aa26.2■■□□□ 1.78
STRADB-201ENST00000194530 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.78
STRADB-201ENST00000194530 NUDT16Q96DE0 195 aaKnown RBP26.2■■□□□ 1.78
STRADB-201ENST00000194530 TBC1D2Q9BYX2 928 aa26.2■■□□□ 1.78
STRADB-201ENST00000194530 METP08581 1390 aa26.2■■□□□ 1.78
STRADB-201ENST00000194530 NUCB1Q02818 461 aa26.19■■□□□ 1.78
STRADB-201ENST00000194530 NRXN3Q9Y4C0 1643 aa26.19■■□□□ 1.78
STRADB-201ENST00000194530 COG3Q96JB2 828 aa26.18■■□□□ 1.78
STRADB-201ENST00000194530 C22orf23Q9BZE7 217 aa26.18■■□□□ 1.78
STRADB-201ENST00000194530 ANTXR1Q9H6X2 564 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms