RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 FANCAO15360 1455 aa13.79□□□□□ -0.2
ACTN1-201ENST00000193403 CDC45O75419 566 aa13.79□□□□□ -0.2
ACTN1-201ENST00000193403 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-201ENST00000193403 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
ACTN1-201ENST00000193403 ZSCAN30Q86W11 494 aa13.79□□□□□ -0.2
ACTN1-201ENST00000193403 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
ACTN1-201ENST00000193403 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-201ENST00000193403 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-201ENST00000193403 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
ACTN1-201ENST00000193403 ST18O60284 1047 aa13.78□□□□□ -0.2
ACTN1-201ENST00000193403 TRPM1Q7Z4N2 1603 aa13.78□□□□□ -0.2
ACTN1-201ENST00000193403 ADGRL1O94910 1474 aa13.78□□□□□ -0.2
ACTN1-201ENST00000193403 TPM2P07951 284 aa13.78□□□□□ -0.2
ACTN1-201ENST00000193403 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
ACTN1-201ENST00000193403 ABCC2Q92887 1545 aa13.77□□□□□ -0.2
ACTN1-201ENST00000193403 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.2
ACTN1-201ENST00000193403 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.2
ACTN1-201ENST00000193403 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.21
ACTN1-201ENST00000193403 CHAMP1Q96JM3 812 aa13.77□□□□□ -0.21
ACTN1-201ENST00000193403 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-201ENST00000193403 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-201ENST00000193403 PRDM15P57071 1507 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-201ENST00000193403 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-201ENST00000193403 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
ACTN1-201ENST00000193403 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
ACTN1-201ENST00000193403 SYCE3A1L190 88 aa13.76□□□□□ -0.21
ACTN1-201ENST00000193403 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-201ENST00000193403 NUCB1Q02818 461 aa13.76□□□□□ -0.21
ACTN1-201ENST00000193403 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 UQCRHP07919 91 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 NUCB2P80303 420 aa13.75□□□□□ -0.21
ACTN1-201ENST00000193403 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
ACTN1-201ENST00000193403 EIF2AK4Q9P2K8 1649 aaKnown RBP13.74□□□□□ -0.21
ACTN1-201ENST00000193403 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
ACTN1-201ENST00000193403 RILPL2Q969X0 211 aa13.74□□□□□ -0.21
ACTN1-201ENST00000193403 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-201ENST00000193403 ZBTB40Q9NUA8 1239 aa13.74□□□□□ -0.21
ACTN1-201ENST00000193403 ABCA8O94911 1581 aa13.74□□□□□ -0.21
ACTN1-201ENST00000193403 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-201ENST00000193403 LTV1Q96GA3 475 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-201ENST00000193403 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
ACTN1-201ENST00000193403 PLCH2O75038 1416 aa13.73□□□□□ -0.21
ACTN1-201ENST00000193403 NOS1P29475 1434 aa13.73□□□□□ -0.21
ACTN1-201ENST00000193403 NEK4P51957 841 aa13.73□□□□□ -0.21
ACTN1-201ENST00000193403 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-201ENST00000193403 GCC1Q96CN9 775 aa13.72□□□□□ -0.21
ACTN1-201ENST00000193403 RABEP1Q15276 862 aa13.72□□□□□ -0.21
ACTN1-201ENST00000193403 TSPYL6Q8N831 410 aa13.72□□□□□ -0.21
ACTN1-201ENST00000193403 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
ACTN1-201ENST00000193403 E9PCH4 1651 aa13.71□□□□□ -0.21
ACTN1-201ENST00000193403 PKP1Q13835 747 aa13.71□□□□□ -0.21
ACTN1-201ENST00000193403 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
ACTN1-201ENST00000193403 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
ACTN1-201ENST00000193403 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
ACTN1-201ENST00000193403 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.22
ACTN1-201ENST00000193403 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.22
ACTN1-201ENST00000193403 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.22
ACTN1-201ENST00000193403 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-201ENST00000193403 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 ZSCAN23Q3MJ62 389 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 TSHZ3Q63HK5 1081 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 SNX21Q969T3 373 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 KLHL40Q2TBA0 621 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.7□□□□□ -0.22
ACTN1-201ENST00000193403 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
ACTN1-201ENST00000193403 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
ACTN1-201ENST00000193403 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
ACTN1-201ENST00000193403 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
ACTN1-201ENST00000193403 CHMP3Q9Y3E7 222 aa13.69□□□□□ -0.22
ACTN1-201ENST00000193403 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
ACTN1-201ENST00000193403 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-201ENST00000193403 OTUD7AQ8TE49 926 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-201ENST00000193403 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
ACTN1-201ENST00000193403 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 TTC37Q6PGP7 1564 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 CROCC2H7BZ55 1655 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 MCCP23508 829 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
ACTN1-201ENST00000193403 RBSNQ9H1K0 784 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 REC8O95072 547 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 GNAI1P63096 354 aa13.68□□□□□ -0.22
ACTN1-201ENST00000193403 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-201ENST00000193403 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
ACTN1-201ENST00000193403 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
ACTN1-201ENST00000193403 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
ACTN1-201ENST00000193403 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
ACTN1-201ENST00000193403 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-201ENST00000193403 TSPOAP1O95153 1857 aa13.66□□□□□ -0.22
ACTN1-201ENST00000193403 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
ACTN1-201ENST00000193403 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-201ENST00000193403 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
ACTN1-201ENST00000193403 DTNBO60941 627 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms