RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 DDX19BQ9UMR2 479 aa25.62■■□□□ 1.69
RCN1-201ENST00000054950 RIPK4P57078 832 aa25.62■■□□□ 1.69
RCN1-201ENST00000054950 HDAC1Q13547 482 aaPredicted RBP25.62■■□□□ 1.69
RCN1-201ENST00000054950 RPGRIP1LQ68CZ1 1315 aa25.61■■□□□ 1.69
RCN1-201ENST00000054950 PANK2Q9BZ23 570 aa25.6■■□□□ 1.69
RCN1-201ENST00000054950 MINK1Q8N4C8 1332 aaPredicted RBP25.6■■□□□ 1.69
RCN1-201ENST00000054950 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
RCN1-201ENST00000054950 ABCC11Q96J66 1382 aa25.6■■□□□ 1.69
RCN1-201ENST00000054950 ABCC3O15438 1527 aa25.6■■□□□ 1.69
RCN1-201ENST00000054950 HECW2Q9P2P5 1572 aa25.59■■□□□ 1.69
RCN1-201ENST00000054950 XRCC6P12956 609 aaKnown RBP eCLIP25.59■■□□□ 1.69
RCN1-201ENST00000054950 FBLN1P23142 703 aa25.59■■□□□ 1.69
RCN1-201ENST00000054950 L1TD1Q5T7N2 865 aaKnown RBP25.59■■□□□ 1.69
RCN1-201ENST00000054950 LNPKQ9C0E8 428 aa25.59■■□□□ 1.69
RCN1-201ENST00000054950 SMC5Q8IY18 1101 aa25.58■■□□□ 1.69
RCN1-201ENST00000054950 NEXMIFQ5QGS0 1516 aa25.58■■□□□ 1.69
RCN1-201ENST00000054950 FYB1O15117 783 aa25.58■■□□□ 1.69
RCN1-201ENST00000054950 CT47B1P0C2W7 299 aaPredicted RBP25.58■■□□□ 1.69
RCN1-201ENST00000054950 VGFO15240 615 aaPredicted RBP25.57■■□□□ 1.68
RCN1-201ENST00000054950 ZBTB40Q9NUA8 1239 aa25.57■■□□□ 1.68
RCN1-201ENST00000054950 CHMP5Q9NZZ3 219 aa25.56■■□□□ 1.68
RCN1-201ENST00000054950 NCBP3Q53F19 620 aaKnown RBP25.56■■□□□ 1.68
RCN1-201ENST00000054950 POGZQ7Z3K3 1410 aa25.56■■□□□ 1.68
RCN1-201ENST00000054950 GOLGA6L3A6NEY3 463 aa25.55■■□□□ 1.68
RCN1-201ENST00000054950 IDI1Q13907 227 aa25.54■■□□□ 1.68
RCN1-201ENST00000054950 PUS7Q96PZ0 661 aaKnown RBP25.53■■□□□ 1.68
RCN1-201ENST00000054950 TRAK2O60296 914 aa25.53■■□□□ 1.68
RCN1-201ENST00000054950 RAPGEF3O95398 923 aa25.53■■□□□ 1.68
RCN1-201ENST00000054950 HSCBQ8IWL3 235 aa25.53■■□□□ 1.68
RCN1-201ENST00000054950 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
RCN1-201ENST00000054950 C1orf115Q9H7X2 142 aa25.52■■□□□ 1.68
RCN1-201ENST00000054950 PRAM1Q96QH2 718 aa25.51■■□□□ 1.68
RCN1-201ENST00000054950 FSD2A1L4K1 749 aa25.51■■□□□ 1.67
RCN1-201ENST00000054950 DIAPH1O60610 1272 aaKnown RBP25.51■■□□□ 1.67
RCN1-201ENST00000054950 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
RCN1-201ENST00000054950 NUCB1Q02818 461 aa25.5■■□□□ 1.67
RCN1-201ENST00000054950 CD163L1Q9NR16 1453 aa25.49■■□□□ 1.67
RCN1-201ENST00000054950 MLH3Q9UHC1 1453 aa25.48■■□□□ 1.67
RCN1-201ENST00000054950 PIK3C2BO00750 1634 aa25.48■■□□□ 1.67
RCN1-201ENST00000054950 KIF16BQ96L93 1317 aa25.48■■□□□ 1.67
RCN1-201ENST00000054950 IL16Q14005 1332 aa25.47■■□□□ 1.67
RCN1-201ENST00000054950 MYO5BQ9ULV0 1848 aa25.47■■□□□ 1.67
RCN1-201ENST00000054950 CHD1LQ86WJ1 897 aa25.47■■□□□ 1.67
RCN1-201ENST00000054950 FOXD4L1Q9NU39 408 aa25.47■■□□□ 1.67
RCN1-201ENST00000054950 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
RCN1-201ENST00000054950 PRKAR2BP31323 418 aa25.46■■□□□ 1.67
RCN1-201ENST00000054950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.46■■□□□ 1.67
RCN1-201ENST00000054950 ELL2O00472 640 aaPredicted RBP25.45■■□□□ 1.66
RCN1-201ENST00000054950 IPO8O15397 1037 aaKnown RBP25.45■■□□□ 1.66
RCN1-201ENST00000054950 RSPH6AQ9H0K4 717 aa25.45■■□□□ 1.66
RCN1-201ENST00000054950 HMOX1P09601 288 aa25.45■■□□□ 1.66
RCN1-201ENST00000054950 PTPRMP28827 1452 aa25.44■■□□□ 1.66
RCN1-201ENST00000054950 ANKRD45Q5TZF3 282 aa25.44■■□□□ 1.66
RCN1-201ENST00000054950 CABP1Q9NZU7 370 aa25.44■■□□□ 1.66
RCN1-201ENST00000054950 LRRC7Q96NW7 1537 aa25.44■■□□□ 1.66
RCN1-201ENST00000054950 CD2BP2O95400 341 aaKnown RBP25.44■■□□□ 1.66
RCN1-201ENST00000054950 RBM25P49756 843 aaKnown RBP25.43■■□□□ 1.66
RCN1-201ENST00000054950 TSPYL6Q8N831 410 aa25.43■■□□□ 1.66
RCN1-201ENST00000054950 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
RCN1-201ENST00000054950 ANKRD26Q9UPS8 1709 aa25.42■■□□□ 1.66
RCN1-201ENST00000054950 DDIT3P35638 169 aa25.42■■□□□ 1.66
RCN1-201ENST00000054950 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
RCN1-201ENST00000054950 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
RCN1-201ENST00000054950 ATAD2Q6PL18 1390 aa25.41■■□□□ 1.66
RCN1-201ENST00000054950 NCOA3Q9Y6Q9 1424 aa25.41■■□□□ 1.66
RCN1-201ENST00000054950 TNPO1Q92973 898 aaKnown RBP25.41■■□□□ 1.66
RCN1-201ENST00000054950 RBM42Q9BTD8 480 aaKnown RBP25.4■■□□□ 1.66
RCN1-201ENST00000054950 CDK19Q9BWU1 502 aa25.4■■□□□ 1.66
RCN1-201ENST00000054950 HSP90AB1P08238 724 aaKnown RBP25.4■■□□□ 1.66
RCN1-201ENST00000054950 ALDH1L2Q3SY69 923 aa25.4■■□□□ 1.66
RCN1-201ENST00000054950 KIF2CQ99661 725 aa25.4■■□□□ 1.66
RCN1-201ENST00000054950 ZBTB7BO15156 539 aaPredicted RBP25.39■■□□□ 1.65
RCN1-201ENST00000054950 HDGFL2Q7Z4V5 671 aaPredicted RBP25.38■■□□□ 1.65
RCN1-201ENST00000054950 PNPLA6Q8IY17 1366 aa25.38■■□□□ 1.65
RCN1-201ENST00000054950 DDX11L8A8MPP1 907 aa25.37■■□□□ 1.65
RCN1-201ENST00000054950 CFAP74Q9C0B2 1584 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 YTHDC2Q9H6S0 1430 aaKnown RBP25.36■■□□□ 1.65
RCN1-201ENST00000054950 SIRT2Q8IXJ6 389 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 VAMP4O75379 141 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 FCHSD2O94868 740 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 BMP2KLQ5H9B9 411 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 MRPL50Q8N5N7 158 aaKnown RBP25.36■■□□□ 1.65
RCN1-201ENST00000054950 SNX21Q969T3 373 aa25.36■■□□□ 1.65
RCN1-201ENST00000054950 FAM135BQ49AJ0 1406 aa25.35■■□□□ 1.65
RCN1-201ENST00000054950 MED14O60244 1454 aa25.35■■□□□ 1.65
RCN1-201ENST00000054950 TBC1D9Q6ZT07 1266 aa25.35■■□□□ 1.65
RCN1-201ENST00000054950 GRPEL1Q9HAV7 217 aa25.35■■□□□ 1.65
RCN1-201ENST00000054950 FBXO31Q5XUX0 539 aaPredicted RBP25.33■■□□□ 1.65
RCN1-201ENST00000054950 EMILIN1Q9Y6C2 1016 aa25.33■■□□□ 1.65
RCN1-201ENST00000054950 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.65
RCN1-201ENST00000054950 MRE11P49959 708 aa25.33■■□□□ 1.64
RCN1-201ENST00000054950 GAS2L3Q86XJ1 694 aa25.33■■□□□ 1.64
RCN1-201ENST00000054950 DIP2CQ9Y2E4 1556 aa25.32■■□□□ 1.64
RCN1-201ENST00000054950 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
RCN1-201ENST00000054950 HSP90AA1P07900 732 aaKnown RBP25.32■■□□□ 1.64
RCN1-201ENST00000054950 WAPLQ7Z5K2 1190 aa25.32■■□□□ 1.64
RCN1-201ENST00000054950 NFE2L2Q16236 605 aa25.31■■□□□ 1.64
RCN1-201ENST00000054950 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
RCN1-201ENST00000054950 CLTCQ00610 1675 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms