RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 A2MP01023 1474 aa12.67□□□□□ -0.38
NIPAL3-201ENST00000003912 RAD21O60216 631 aa12.67□□□□□ -0.38
NIPAL3-201ENST00000003912 FCHSD2O94868 740 aa12.67□□□□□ -0.38
NIPAL3-201ENST00000003912 TPM4P67936 248 aa12.67□□□□□ -0.38
NIPAL3-201ENST00000003912 H3BQV1 296 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 FOXO3O43524 673 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 NUP153P49790 1475 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 NOS1P29475 1434 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 SF3A1Q15459 793 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
NIPAL3-201ENST00000003912 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-201ENST00000003912 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-201ENST00000003912 KIAA0556O60303 1618 aa12.65□□□□□ -0.39
NIPAL3-201ENST00000003912 DUOX2Q9NRD8 1548 aa12.65□□□□□ -0.39
NIPAL3-201ENST00000003912 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
NIPAL3-201ENST00000003912 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 ERICH2A1L162 156 aa12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
NIPAL3-201ENST00000003912 MSH6P52701 1360 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ANO2Q9NQ90 1003 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 NGLY1Q96IV0 654 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 KIAA2012Q0VF49 1180 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 TRIM29Q14134 588 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ERC1Q8IUD2 1116 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
NIPAL3-201ENST00000003912 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 CPLX1O14810 134 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 INTS3Q68E01 1043 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 TOM1O60784 492 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 STARD3NLO95772 234 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 CNNM1Q9NRU3 951 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 TCEAL9Q9UHQ7 104 aa12.62□□□□□ -0.39
NIPAL3-201ENST00000003912 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 GNAI2P04899 355 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 NUP160Q12769 1436 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 SCAF11Q99590 1463 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-201ENST00000003912 NFXL1Q6ZNB6 911 aa12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 NME9Q86XW9 330 aa12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 MYL6BP14649 208 aa12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
NIPAL3-201ENST00000003912 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
NIPAL3-201ENST00000003912 PDE4AP27815 886 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 FYB1O15117 783 aa12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-201ENST00000003912 TRAPPC8Q9Y2L5 1435 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 PHF14O94880 888 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 MCTP1Q6DN14 999 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 EXOC5O00471 708 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
NIPAL3-201ENST00000003912 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 HIP1O00291 1037 aa12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 RPRD2Q5VT52 1461 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 MSNP26038 577 aaKnown RBP12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
NIPAL3-201ENST00000003912 NSD2O96028 1365 aa12.55□□□□□ -0.4
NIPAL3-201ENST00000003912 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
NIPAL3-201ENST00000003912 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
NIPAL3-201ENST00000003912 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 737.1 ms