RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cdc45Q9Z1X9 566 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 NefhP19246 1090 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Efcab5A0JP43 1406 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Trim55G3X8Y1 545 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Adck5Q80V03 582 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Rpgrip1lQ8CG73 1264 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Sos1Q62245 1319 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Soga1E1U8D0 1418 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Jakmip2D3YXK0 820 aa10.85□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Nap1l2P51860 460 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Plekhg5Q66T02 1073 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Tdrd9Q14BI7 1383 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Wwc1Q5SXA9 1104 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Gbp4Q61107 620 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Mrvi1Q9WUX5 899 aaKnown RBP10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 ScaperF8VQ70 1398 aaKnown RBP10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ift140E9PY46 1464 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Zpr1Q62384 459 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Sirt1Q923E4 737 aa10.84□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Washc2Q6PGL7 1334 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Pabpn1Q8CCS6 302 aaKnown RBP10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Krt84Q99M73 603 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Ccdc83Q9D4V3 305 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 TnmdQ9EP64 317 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Pafah1b1P63005 410 aaKnown RBP10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Cep89Q9CZX2 791 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Atp2b2Q9R0K7 1198 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 NinlQ6ZQ12 1394 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Cfap58B2RW38 873 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Pde4cQ3UEI1 686 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Cetn2Q9R1K9 172 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Pmfbp1Q9WVQ0 1022 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Kcnh8P59111 1102 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Otud6bQ8K2H2 294 aa10.83□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Mphosph10Q810V0 681 aaKnown RBP10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 ImmtQ8CAQ8 757 aaKnown RBP10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Fmnl2A2APV2 1086 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Gtf2f1Q3THK3 508 aaKnown RBP10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Atf3Q60765 181 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Ppm1fQ8CGA0 452 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Plekhd1B2RPU2 505 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Prm3Q62100 101 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Znf287Q9EQB9 759 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Rnf214Q8BFU3 668 aaKnown RBP10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Pank1Q8K4K6 548 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Erc1Q99MI1 1120 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 MicalclQ9D5U9 680 aa10.82□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Paf1Q8K2T8 535 aa10.81□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Tnpo1Q8BFY9 898 aaKnown RBP10.81□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Stxbp4Q9WV89 557 aa10.81□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 TkfcQ8VC30 578 aa10.81□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Arglu1Q3UL36 271 aaKnown RBP10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Senp3Q9EP97 568 aaKnown RBP10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Nap1l5Q9JJF0 156 aa10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Myom3A2ABU4 1439 aa10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Ppp2r1aQ76MZ3 589 aa10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Spag5Q7TME2 1165 aa10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Slc13a4Q8BZ82 625 aa10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Larp1Q6ZQ58 1072 aaKnown RBP10.8□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 NcapgE9PWG6 1004 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Smg7Q5RJH6 1138 aaKnown RBP10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Gsdma2Q32M21 443 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Zscan20B2KFW1 1030 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Ccdc102aQ3TMW1 549 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Znf710Q3U288 666 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Mipol1Q9D9F8 279 aa10.79□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Sel1lQ9Z2G6 790 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Cnnm3Q32NY4 713 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Top1mtQ8R4U6 593 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Arhgap31A6X8Z5 1425 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Trim34bJ3QNR8 485 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Abcd1P48410 736 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Fam13bQ8K2H3 851 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 ZgpatQ8VDM1 511 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Smtnl1Q99LM3 459 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 A0A0U1RNP2 1173 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Gm7361D3Z6R1 267 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Gm10471E9Q1C7 252 aa10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 TbcaP48428 108 aaKnown RBP10.78□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 LarsQ8BMJ2 1178 aa10.77□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Hook3Q8BUK6 718 aa10.77□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Riok1Q922Q2 567 aa10.77□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Slc52a2Q9D8F3 450 aa10.77□□□□□ -0.68
Ccdc47-201ENSMUST00000002043 Sptbn5F6UCX4 1208 aa10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Nup88Q8CEC0 753 aaKnown RBP10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Cfap53Q9D439 514 aa10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 IbtkQ6ZPR6 1352 aaKnown RBP10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 CastP51125 788 aa10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ccdc172Q810N9 267 aa10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Olfml1Q8BSH2 233 aa10.77□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Eif5P59325 429 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Prpf4bQ61136 1007 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Washc4Q3UMB9 1173 aa10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Brms1Q99N20 246 aa10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Znf771Q8BJ90 317 aa10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Top2aQ01320 1528 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Wdr33Q8K4P0 1330 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ddx46Q569Z5 1032 aaKnown RBP10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Ankrd1Q9CR42 319 aa10.76□□□□□ -0.69
Ccdc47-201ENSMUST00000002043 Mum1Q6DID5 682 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms