RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SLC29A2Q14542 456 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 MORF4L2Q15014 288 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 SKIDA1Q1XH10 827 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 SYCP2LQ5T4T6 812 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 RAP1GAP2Q684P5 730 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ITIH5Q86UX2 942 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TCEAL8Q8IYN2 117 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CACNA2D3Q8IZS8 1091 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CNPY4Q8N129 248 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ELMOD1Q8N336 334 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 PIP4P2Q8N4L2 257 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 OTUD6BQ8N6M0 293 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 UHMK1Q8TAS1 419 aaKnown RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CCDC110Q8TBZ0 833 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ATXN2LQ8WWM7 1075 aaKnown RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 HTR3CQ8WXA8 447 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 OVCA2Q8WZ82 227 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CLP1Q92989 425 aaKnown RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CHMP6Q96FZ7 201 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 CELF6Q96J87 481 aaKnown RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TTC25Q96NG3 672 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF317Q96PQ6 595 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 LGMNQ99538 433 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TCF25Q9BQ70 676 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 KLC2Q9H0B6 622 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ADAM7Q9H2U9 754 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 USP29Q9HBJ7 922 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TRPC7Q9HCX4 862 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 SAYSD1Q9NPB0 183 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 RAB6BQ9NRW1 208 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 UXTQ9UBK9 157 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 FETUBQ9UGM5 382 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 VANGL2Q9ULK5 521 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 RWDD3Q9Y3V2 267 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 RAD54BQ9Y620 910 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ANKRD36A6QL64 1941 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF840PA6NDX5 716 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 RNF103O00237 685 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 FGF10O15520 208 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 TGM5O43548 720 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ACSL3O95573 720 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ZDHHC11BP0C7U3 371 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 IRF1P10914 325 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 MYOGP15173 224 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 VAV1P15498 845 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 TSHRP16473 764 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 HMGA1P17096 107 aaKnown RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 MX2P20592 715 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 HTR7P34969 479 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ARL4CP56559 192 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ERVFC1P60507 584 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 EIF4EBP2Q13542 120 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 AUHQ13825 339 aaKnown RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 STAT4Q14765 748 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 HP1BP3Q5SSJ5 553 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 RNASEH2BQ5TBB1 312 aaKnown RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 PIK3R6Q5UE93 754 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ANKRD22Q5VYY1 191 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 NUGGCQ68CJ6 796 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 C4orf22Q6V702 233 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CCDC149Q6ZUS6 474 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CENPUQ71F23 418 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 DNAJB7Q7Z6W7 309 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 C14orf80Q86SX3 495 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CHSY1Q86X52 802 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 ZNF354CQ86Y25 554 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 TDRPQ86YL5 185 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 SUGP1Q8IWZ8 645 aaKnown RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 TP53INP2Q8IXH6 220 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 GPR65Q8IYL9 337 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 MICALL1Q8N3F8 863 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 NPWQ8N729 165 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 TTC16Q8NEE8 873 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 DEPDC1BQ8WUY9 529 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CPT1BQ92523 772 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 PRCCQ92733 491 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 SLC39A13Q96H72 371 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 BTN2A3PQ96KV6 586 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 OLFM3Q96PB7 478 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 KLHL5Q96PQ7 755 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 RBM15Q96T37 977 aaKnown RBP eCLIP9.09□□□□□ -0.954e-7■■■□□ 17.3
PHGDH-219ENST00000641513 CCDC77Q9BR77 488 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 C17orf80Q9BSJ5 609 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CEP41Q9BYV8 373 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 CDC42EP4Q9H3Q1 356 aaKnown RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 SEMA4AQ9H3S1 761 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 PRDM12Q9H4Q4 367 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 MPP6Q9NZW5 540 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 SENP1Q9P0U3 644 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 BCCIPQ9P287 314 aaKnown RBP eCLIP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 KLHL8Q9P2G9 620 aaPredicted RBP9.09□□□□□ -0.95
PHGDH-219ENST00000641513 MAFFQ9ULX9 164 aa9.09□□□□□ -0.95
PHGDH-219ENST00000641513 SHOC2Q9UQ13 582 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms