RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HEMGNQ9BXL5 484 aa13.33□□□□□ -0.28
PHGDH-218ENST00000641491 TLR10Q9BXR5 811 aa13.33□□□□□ -0.28
PHGDH-218ENST00000641491 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.28
PHGDH-218ENST00000641491 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
PHGDH-218ENST00000641491 ARHGAP42A6NI28 874 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ANHXE9PGG2 379 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 DFFAO00273 331 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 CES2O00748 559 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 MCF2LO15068 1137 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 CST8O60676 142 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 STK10O94804 968 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 LUC7L3O95232 432 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 TYRP14679 529 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ERCC2P18074 760 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 TGM2P21980 687 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 SLC6A4P31645 630 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 RPS24P62847 133 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ZXDBP98169 803 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 TDGQ13569 410 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 CIR1Q86X95 450 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ATPAF2Q8N5M1 289 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 RTL3Q8N8U3 475 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 DNASE1L2Q92874 299 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 MSANTD3Q96H12 275 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 RNF157Q96PX1 679 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ECT2Q9H8V3 914 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 ARHGEF4Q9NR80 690 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 CWC15Q9P013 229 aaKnown RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 KIAA1522Q9P206 1035 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-218ENST00000641491 DEC1Q9P2X7 70 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 RNF14Q9UBS8 474 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 HEY1Q9Y5J3 304 aa13.32□□□□□ -0.28
PHGDH-218ENST00000641491 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 hCG_1818297A0A087WSY0 165 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FAM72CH0Y354 149 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FGGP02679 453 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 CYP17A1P05093 508 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 ASGR2P07307 311 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 CD48P09326 243 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 PYGMP11217 842 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 ARSAP15289 507 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 AMPD1P23109 780 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 PTPN7P35236 360 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 CDKN2BP42772 138 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 NR2C2P49116 596 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 DGKGP49619 791 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 PEX5P50542 639 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 POLD3Q15054 466 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-218ENST00000641491 LLGL1Q15334 1064 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FAM72AQ5TYM5 149 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FAM72DQ6L9T8 149 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 C14orf80Q86SX3 495 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 SETD3Q86TU7 594 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FAM72BQ86X60 149 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 RSAD2Q8WXG1 361 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 ALG3Q92685 438 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 IGSF8Q969P0 613 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 WBP2Q969T9 261 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 RSPRY1Q96DX4 576 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 PRICKLE1Q96MT3 831 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-218ENST00000641491 SPON2Q9BUD6 331 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 SLC2A11Q9BYW1 496 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 C8orf33Q9H7E9 229 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-218ENST00000641491 SP110Q9HB58 689 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 ANLNQ9NQW6 1124 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 TMEM248Q9NWD8 314 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 VPS28Q9UK41 221 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 SLC8A2Q9UPR5 921 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 EFR3BQ9Y2G0 817 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
PHGDH-218ENST00000641491 DRGXA6NNA5 263 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 H7C0C1 242 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 NCAM2O15394 837 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 DCXO43602 365 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 APODP05090 189 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 SRFP11831 508 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 KRT10P13645 584 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 PRLRP16471 622 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 HOXC13P31276 330 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ACTN2P35609 894 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 NNMTP40261 264 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ATP5OP48047 213 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 NDST2P52849 883 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms