RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SRPK3Q9UPE1 567 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 DMTF1Q9Y222 760 aa8.15□□□□□ -1.1
PHGDH-217ENST00000641455 TLN1Q9Y490 2541 aaKnown RBP8.15□□□□□ -1.1
PHGDH-217ENST00000641455 DOCK9Q9BZ29 2069 aa8.15□□□□□ -1.11
PHGDH-217ENST00000641455 CCDC187A0A096LP49 1063 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 EDDM13A0A1B0GTR0 161 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 TARSL2A2RTX5 802 aaKnown RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 NEMP2A6NFY4 417 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 PRAMEF26H0Y7S4 382 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 LATO43561 262 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 RTN2O75298 545 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 PIAS2O75928 621 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 NEBLO76041 1014 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 ASLP04424 464 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 NUDT1P36639 197 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 STAT6P42226 847 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 YWHAGP61981 247 aaKnown RBP eCLIP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF177Q13360 481 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 MAPK8IP2Q13387 824 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 TGIF1Q15583 401 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 TBR1Q16650 682 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF542PQ5EBM4 170 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 MANEAQ5SRI9 462 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 C9orf64Q5T6V5 341 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 GUSBP11Q6P575 273 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 RFWD3Q6PCD5 774 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 KIAA0907Q7Z7F0 614 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 UNC93AQ86WB7 457 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 CCDC117Q8IWD4 279 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 XXYLT1Q8NBI6 393 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 RNF139Q8WU17 664 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 MYO19Q96H55 970 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 PRR11Q96HE9 360 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 SEMA3CQ99985 751 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 DUSP23Q9BVJ7 150 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 SLC25A18Q9H1K4 315 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 EPN3Q9H201 632 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 CAAP1Q9H8G2 361 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 VRTNQ9H8Y1 702 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 AGPAT3Q9NRZ7 376 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 KLHL11Q9NVR0 708 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 NYNRINQ9P2P1 1898 aaKnown RBP8.14□□□□□ -1.11
PHGDH-217ENST00000641455 NBASA2RRP1 2371 aa8.14□□□□□ -1.11
PHGDH-217ENST00000641455 SPTBN1Q01082 2364 aaKnown RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 LY6G6EA0A0G2JKS1 128 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 FRMD3A2A2Y4 597 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 TYW5A2RUC4 315 aaKnown RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 K7ESM1 405 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 SLC31A1O15431 190 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 EXOC3O60645 756 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 MOCS3O95396 460 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ITGA2BP08514 1039 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 GIMD1P0DJR0 217 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 PRLRP16471 622 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 MZF1P28698 734 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 SLC5A2P31639 672 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 CTSOP43234 321 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 NCAPHQ15003 741 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 SPOPLQ6IQ16 392 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 C14orf80Q86SX3 495 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 VASH2Q86V25 355 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 NELFCDQ8IXH7 590 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 CARNMT1Q8N4J0 409 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF557Q8N988 423 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ZNF564Q8TBZ8 553 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 KLK6Q92876 244 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 TTC17Q96AE7 1141 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 TWNKQ96RR1 684 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 NT5C1AQ9BXI3 368 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 DUSP16Q9BY84 665 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 PANK2Q9BZ23 570 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 DNAI2Q9GZS0 605 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 EPB41L5Q9HCM4 733 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 OLA1Q9NTK5 396 aaKnown RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 DNAJC28Q9NX36 388 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 SEPT10Q9P0V9 454 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ARHGAP20Q9P2F6 1191 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 SFMBT1Q9UHJ3 866 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 ERVW-1Q9UQF0 538 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 HBS1LQ9Y450 684 aaKnown RBP8.13□□□□□ -1.11
PHGDH-217ENST00000641455 USP3Q9Y6I4 520 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 U3KQA8 63 aa8.13□□□□□ -1.11
PHGDH-217ENST00000641455 FLNCQ14315 2725 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 ZFC3H1O60293 1989 aaKnown RBP8.12□□□□□ -1.11
PHGDH-217ENST00000641455 ICE1Q9Y2F5 2266 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 GOLGA6L7A0A1B0GV03 622 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 C10orf142B7Z368 130 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 SCAMP1O15126 338 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 MUSKO15146 869 aa8.12□□□□□ -1.11
PHGDH-217ENST00000641455 MSI1O43347 362 aaKnown RBP8.12□□□□□ -1.11
PHGDH-217ENST00000641455 PLRG1O43660 514 aaKnown RBP8.12□□□□□ -1.11
PHGDH-217ENST00000641455 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms