RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 FAM72CH0Y354 149 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 RNF103O00237 685 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 EEF2KO00418 725 aaKnown RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 PPP1R12AO14974 1030 aaPredicted RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 ALDH2P05091 517 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 ELF3P78545 371 aaPredicted RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 FAM72AQ5TYM5 149 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 FAM72DQ6L9T8 149 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TAC4Q86UU9 113 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 FAM72BQ86X60 149 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 PARP9Q8IXQ6 854 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 C10orf82Q8WW14 230 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 IRGQQ8WZA9 623 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TOX2Q96NM4 488 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 PRDM12Q9H4Q4 367 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 MANSC1Q9H8J5 431 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 EIF2B3Q9NR50 452 aaKnown RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TBX21Q9UL17 535 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 DCLK1O15075 740 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 MGRN1O60291 552 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 GALTP07902 379 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 ALDH3A1P30838 453 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 SKIV2L2P42285 1042 aaKnown RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 ARPP19P56211 112 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 SCAPQ12770 1279 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 SETDB1Q15047 1291 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 DDR2Q16832 855 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 RTP2Q5QGT7 225 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 FUT10Q6P4F1 479 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 TRMT10BQ6PF06 316 aaKnown RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 RSPO2Q6UXX9 243 aaPredicted RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 CYS1Q717R9 158 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 TAS1R1Q7RTX1 841 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 TBC1D1Q86TI0 1168 aaPredicted RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 DCP1BQ8IZD4 617 aaKnown RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 ATAD1Q8NBU5 361 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 CCNYQ8ND76 341 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 PGAP3Q96FM1 320 aaPredicted RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 FAM111AQ96PZ2 611 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 COLEC11Q9BWP8 271 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 COPEO14579 308 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 HGSO14964 777 aaPredicted RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 HOXA2O43364 376 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 DCTN3O75935 186 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 KRT38O76015 456 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 CSH1P0DML2 217 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 CSH2P0DML3 217 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 FGFR3P22607 806 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 SEMA3BQ13214 749 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 FYB2Q5VWT5 728 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 LRRC8BQ6P9F7 803 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 PDCD7Q8N8D1 485 aaKnown RBP15.49■□□□□ 0.07
TRIM3-215ENST00000639856 ZNF398Q8TD17 642 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 GPR152Q8TDT2 470 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 PTPRN2Q92932 1015 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 MTBPQ96DY7 904 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 STAMBPL1Q96FJ0 436 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 LRRC37BQ96QE4 947 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 RRN3Q9NYV6 651 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 MOCS1Q9NZB8 636 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 FBXW11Q9UKB1 542 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 CHKBQ9Y259 395 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 SNX10Q9Y5X0 201 aa15.49■□□□□ 0.07
TRIM3-215ENST00000639856 UGT1A9O60656 530 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 RFPL1O75677 317 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 SOAT2O75908 522 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 CCNB1P14635 433 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 NQO1P15559 274 aaKnown RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 CCNFP41002 786 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 WASHC5Q12768 1159 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 PARP6Q2NL67 630 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 SCML4Q8N228 414 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 DQX1Q8TE96 717 aaKnown RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 KLHL29Q96CT2 875 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 OXNAD1Q96HP4 312 aaPredicted RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 SRPK1Q96SB4 655 aaKnown RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 MRPL9Q9BYD2 267 aaKnown RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 IQCGQ9H095 443 aaKnown RBP15.48■□□□□ 0.07
TRIM3-215ENST00000639856 MYLK2Q9H1R3 596 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 UGT1A7Q9HAW7 530 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 UGT1A10Q9HAW8 530 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 UGT1A8Q9HAW9 530 aa15.48■□□□□ 0.07
TRIM3-215ENST00000639856 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 F5H423 210 aaPredicted RBP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 UNC5CO95185 931 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TROVE2P10155 538 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ERCC2P18074 760 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 HCAR3P49019 387 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 STEAP4Q687X5 459 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ZNF280DQ6N043 979 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ASRGL1Q7L266 308 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 SCD5Q86SK9 330 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ZNF567Q8N184 647 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 LRRC43Q8N309 656 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 TTC17Q96AE7 1141 aa15.47■□□□□ 0.07
TRIM3-215ENST00000639856 ERP27Q96DN0 273 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms