RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PTPN3P26045 913 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 CYP2C18P33260 490 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SCTRP47872 440 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 PGGT1BP53609 377 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 TBX4P57082 545 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 TAF10Q12962 218 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 XRCC4Q13426 336 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 BFSP2Q13515 415 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 ARHGEF6Q15052 776 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 EMC10Q5UCC4 262 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 RAP1GAP2Q684P5 730 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 GPATCH11Q8N954 259 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SLC44A1Q8WWI5 657 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SEPT8Q92599 483 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SCYL1Q96KG9 808 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 LRRC37BQ96QE4 947 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 TSSK1BQ9BXA7 367 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 UNC93B1Q9H1C4 597 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SP110Q9HB58 689 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 SMPD4Q9NXE4 827 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 MGAMO43451 1857 aa9.92□□□□□ -0.82
CACNA1A-248ENST00000637774 KIF3CO14782 793 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 SPAG6O75602 509 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 AVPR1AP37288 418 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 RCN2Q14257 317 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CHI3L2Q15782 390 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 PARP6Q2NL67 630 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 OTUD1Q5VV17 481 aaPredicted RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ICE2Q659A1 982 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ITPRIPL1Q6GPH6 555 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CMC1Q7Z7K0 106 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 NUP93Q8N1F7 819 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 DCAKDQ8WVC6 231 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 TBC1D31Q96DN5 1066 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 NT5MQ9NPB1 228 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CHRAC1Q9NRG0 131 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 IARS2Q9NSE4 1012 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CPSF2Q9P2I0 782 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ADAM28Q9UKQ2 775 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ARVCFO00192 962 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 FKTNO75072 461 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ZWINTO95229 277 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 RPLP2P05387 115 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 YWHAQP27348 245 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ZBTB17Q13105 803 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 MRPL10Q7Z7H8 261 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 AGGF1Q8N302 714 aaeCLIP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 PDCD6IPQ8WUM4 868 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 FAM136AQ96C01 138 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 PPP1R36Q96LQ0 422 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 RMDN2Q96LZ7 410 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 TSNARE1Q96NA8 513 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 SLC2A13Q96QE2 648 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 UPF3AQ9H1J1 476 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ECT2Q9H8V3 914 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 KANSL3Q9P2N6 904 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 G3BP2Q9UN86 482 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 TRIM33Q9UPN9 1127 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 HACD1B0YJ81 288 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 BUD23O43709 281 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 TCEA3O75764 348 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ASMTLO95671 621 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CCNB1P14635 433 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 KCNA4P22459 653 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 USP46P62068 366 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 RPL10AP62906 217 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 WASHC5Q12768 1159 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 STRA8Q7Z7C7 330 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 PSTKQ8IV42 348 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 OR6P1Q8NGX9 317 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 SIGLEC10Q96LC7 697 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 FICDQ9BVA6 458 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 TRIM55Q9BYV6 548 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 CATSPERBQ9H7T0 1116 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 ZNF395Q9H8N7 513 aaPredicted RBP9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 MARCH2Q9P0N8 246 aa9.91□□□□□ -0.82
CACNA1A-248ENST00000637774 LAMA3Q16787 3333 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 TARSP26639 723 aaKnown RBP9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 HOXC8P31273 242 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 OR1D2P34982 312 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 GLRBP48167 497 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 VEGFBP49765 207 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 MXRA7P84157 204 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 C14orf80Q86SX3 495 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 RELL1Q8IUW5 271 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 ARID3BQ8IVW6 561 aaPredicted RBP9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 PNPLA1Q8N8W4 532 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 FRMD8Q9BZ67 464 aaPredicted RBP9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 HIPK3Q9H422 1215 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 CAB39LQ9H9S4 337 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
CACNA1A-248ENST00000637774 SLC39A10Q9ULF5 831 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms