RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TRAV19A0A0A6YYK7 116 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 FGF19O95750 216 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CKMP06732 381 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 RHOQP17081 205 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 SERPINB6P35237 376 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 GPS1Q13098 491 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 ADGRF1Q5T601 910 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 POTEHQ6S545 545 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 ARHGAP12Q8IWW6 846 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CCNYQ8ND76 341 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CCHCR1Q8TD31 782 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 IGFLR1Q9H665 355 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 ZNF446Q9NWS9 450 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 WHRNQ9P202 907 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 STOML2Q9UJZ1 356 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CFAP69A5D8W1 941 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 NCAM2O15394 837 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 POU2F2P09086 479 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 VAV1P15498 845 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 GALNT2Q10471 571 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 AP1B1Q10567 949 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 PRKD1Q15139 912 aaPredicted RBP21.66■■□□□ 1.06
CLN8-213ENST00000637156 P3H1Q32P28 736 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 GPR158Q5T848 1215 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 TFAP2DQ7Z6R9 452 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CDKL3Q8IVW4 592 aaPredicted RBP21.66■■□□□ 1.06
CLN8-213ENST00000637156 LGI2Q8N0V4 545 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 CFAP52Q8N1V2 620 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 LZTR1Q8N653 840 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 LEMD2Q8NC56 503 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 P2RY11Q96G91 374 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 SNF8Q96H20 258 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 SLC39A8Q9C0K1 460 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 TMEM248Q9NWD8 314 aa21.66■■□□□ 1.06
CLN8-213ENST00000637156 SPDYE4A6NLX3 237 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 TRDMT1O14717 391 aaKnown RBP21.65■■□□□ 1.06
CLN8-213ENST00000637156 SCAMP3O14828 347 aaKnown RBP21.65■■□□□ 1.06
CLN8-213ENST00000637156 PAPLNO95428 1278 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 PFKLP17858 780 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 AFMIDQ63HM1 303 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 TMC5Q6UXY8 1006 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 HTR3CQ8WXA8 447 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLN8-213ENST00000637156 SMG9Q9H0W8 520 aaKnown RBP21.65■■□□□ 1.06
CLN8-213ENST00000637156 NOL6Q9H6R4 1146 aaKnown RBP21.65■■□□□ 1.06
CLN8-213ENST00000637156 MYO9BQ13459 2157 aa21.65■■□□□ 1.06
CLN8-213ENST00000637156 F5H5T6 163 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 PPP1R12AO14974 1030 aaPredicted RBP21.64■■□□□ 1.06
CLN8-213ENST00000637156 GARSP41250 739 aaKnown RBP21.64■■□□□ 1.06
CLN8-213ENST00000637156 ITGA8P53708 1063 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 HEATR6Q6AI08 1181 aaKnown RBP21.64■■□□□ 1.06
CLN8-213ENST00000637156 Q6ZNB5 142 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 CIR1Q86X95 450 aaPredicted RBP21.64■■□□□ 1.06
CLN8-213ENST00000637156 CMTM8Q8IZV2 173 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 UMODL1-AS1Q8N2C9 162 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 CDCA3Q99618 268 aaPredicted RBP21.64■■□□□ 1.06
CLN8-213ENST00000637156 TASP1Q9H6P5 420 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 PDE4DIPQ5VU43 2346 aa21.64■■□□□ 1.06
CLN8-213ENST00000637156 MX2P20592 715 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 PPIDQ08752 370 aaKnown RBP21.64■■□□□ 1.05
CLN8-213ENST00000637156 CALCOCO2Q13137 446 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 MAP9Q49MG5 647 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 ELMSAN1Q6PJG2 1045 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 ARHGAP36Q6ZRI8 547 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 DEPDC1BQ8WUY9 529 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 SMG7Q92540 1137 aaKnown RBP21.64■■□□□ 1.05
CLN8-213ENST00000637156 HDAC11Q96DB2 347 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 ZSWIM3Q96MP5 696 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 ZNF576Q9H609 170 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 CCL26Q9Y258 94 aa21.64■■□□□ 1.05
CLN8-213ENST00000637156 ZFP37Q9Y6Q3 630 aaPredicted RBP21.64■■□□□ 1.05
CLN8-213ENST00000637156 NOTCH4Q99466 2003 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 C5orf42Q9H799 3197 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 CLUHO75153 1309 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 C5orf60A6NFR6 353 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 GCATO75600 419 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 DDX6P26196 483 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLN8-213ENST00000637156 SGSHP51688 502 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 RPS24P62847 133 aaKnown RBP21.63■■□□□ 1.05
CLN8-213ENST00000637156 EMBQ6PCB8 327 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 RHBDF2Q6PJF5 856 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 HTR3DQ70Z44 454 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 TTC16Q8NEE8 873 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 CCDC110Q8TBZ0 833 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 PIDD1Q9HB75 910 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 ANAPC5Q9UJX4 755 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 TPX2Q9ULW0 747 aaKnown RBP21.63■■□□□ 1.05
CLN8-213ENST00000637156 OBSL1O75147 1896 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 NUP205Q92621 2012 aa21.63■■□□□ 1.05
CLN8-213ENST00000637156 DFFAO00273 331 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 LEFTY2O00292 366 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 DNALI1O14645 258 aaPredicted RBP21.62■■□□□ 1.05
CLN8-213ENST00000637156 WASHC5Q12768 1159 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 CBX2Q14781 532 aaPredicted RBP21.62■■□□□ 1.05
CLN8-213ENST00000637156 IZUMO3Q5VZ72 239 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 TAB3Q8N5C8 712 aaPredicted RBP21.62■■□□□ 1.05
CLN8-213ENST00000637156 ITFG1Q8TB96 612 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 ZSCAN18Q8TBC5 510 aaPredicted RBP21.62■■□□□ 1.05
CLN8-213ENST00000637156 LRRC45Q96CN5 670 aa21.62■■□□□ 1.05
CLN8-213ENST00000637156 PRICKLE1Q96MT3 831 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms