RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ARID3AQ99856 593 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 LACRTQ9GZZ8 138 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
CTSD-208ENST00000636843 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 KLK13Q9UKR3 277 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 HBS1LQ9Y450 684 aaKnown RBP13.12□□□□□ -0.31
CTSD-208ENST00000636843 PCDHB9Q9Y5E1 797 aa13.12□□□□□ -0.31
CTSD-208ENST00000636843 RCCD1A6NED2 376 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 METTL12A8MUP2 240 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 SH3BP5O60239 455 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 IGLV3-19P01714 112 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 ACADMP11310 421 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 MAOBP27338 520 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 FMO5P49326 533 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 BCAT1P54687 386 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 ARID5AQ03989 594 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 KLHL30Q0D2K2 578 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 GRIK2Q13002 908 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 MPPE1Q53F39 396 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 PAPD7Q5XG87 772 aaKnown RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 RAB44Q7Z6P3 723 aaPredicted RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 RBBP8NLQ8NC74 664 aaPredicted RBP13.11□□□□□ -0.31
CTSD-208ENST00000636843 CIPCQ9C0C6 399 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 PCED1AQ9H1Q7 454 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 CLEC4EQ9ULY5 219 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
CTSD-208ENST00000636843 ADAMTS9Q9P2N4 1935 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 SRRM3A6NNA2 597 aaPredicted RBP13.1□□□□□ -0.31
CTSD-208ENST00000636843 P4HA2O15460 535 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 PRKCIP41743 596 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 COPAP53621 1224 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 PDE4CQ08493 712 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 BST2Q10589 180 aaKnown RBP13.1□□□□□ -0.31
CTSD-208ENST00000636843 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 SGO2Q562F6 1265 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 TMEM215Q68D42 235 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
CTSD-208ENST00000636843 WFIKKN2Q8TEU8 576 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 RNF139Q8WU17 664 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 CACNA1GO43497 2377 aa13.1□□□□□ -0.31
CTSD-208ENST00000636843 BCAT2O15382 392 aaPredicted RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 LATS1O95835 1130 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 EPHX1P07099 455 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 ZNF883P0CG24 379 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 PRKCHP24723 683 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 HOXD9P28356 352 aaPredicted RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 JAM2P57087 298 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 CUL2Q13617 745 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 IL27RAQ6UWB1 636 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 SCML4Q8N228 414 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 OR2T3Q8NH03 318 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 ADAMTS14Q8WXS8 1223 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 MIR1-1HGQ9H1L0 117 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 RALYQ9UKM9 306 aaKnown RBP13.09□□□□□ -0.31
CTSD-208ENST00000636843 KIAA1257Q9ULG3 409 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 SAR1BQ9Y6B6 198 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
CTSD-208ENST00000636843 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CTAGE15A4D2H0 777 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 TULP2O00295 520 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 PMM2O15305 246 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 GFPT2O94808 682 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CER1O95813 267 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CTAGE8P0CG41 777 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 SETSIPP0DME0 302 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 C7P10643 843 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 VDRP11473 427 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 FERP16591 822 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CKAP4Q07065 602 aaKnown RBP13.08□□□□□ -0.31
CTSD-208ENST00000636843 ADIGQ0VDE8 80 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CETN1Q12798 172 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CBWD6Q4V339 395 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.31
CTSD-208ENST00000636843 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms