RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CNOT3O75175 753 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 SCNN1GP51170 649 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 GPR141Q7Z602 305 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 MCEMP1Q8IX19 187 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 IDI2Q9BXS1 227 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 TKTL2Q9H0I9 626 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 PABPC1P11940 636 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 CAP2P40123 477 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 ERO1BQ86YB8 467 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 ARNTL2Q8WYA1 636 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 C1QTNF7Q9BXJ2 289 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 A1CFQ9NQ94 594 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 DSEQ9UL01 958 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 VPS9D1Q9Y2B5 631 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 BMP10O95393 424 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 RPA3P35244 121 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 MTMR8Q96EF0 704 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 CNPY3Q9BT09 278 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 DIABLOQ9NR28 239 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 FAM153AQ9UHL3 310 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 SMG5Q9UPR3 1016 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 SDR42E2A6NKP2 422 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 DNALI1O14645 258 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 CXCL14O95715 111 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 NPY2RP49146 381 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 NUP107P57740 925 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 SRLQ86TD4 932 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC41A1Q8IVJ1 513 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 COPS5Q92905 334 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
CACNA1A-227ENST00000636549 A0A075B6Q4 140 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PTPN1P18031 435 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 DMPKQ09013 629 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 NFIAQ12857 509 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 CARTPTQ16568 116 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC45A4Q5BKX6 768 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 SEL1L3Q68CR1 1132 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 TTC7BQ86TV6 843 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 SMYD1Q8NB12 490 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 KLK6Q92876 244 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 CALR3Q96L12 384 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 AHSPQ9NZD4 102 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 AQP5P55064 265 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 USP49Q70CQ1 688 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PPP1R2P1Q96PQ5 205 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 TIPINQ9BVW5 301 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 NPTX2P47972 431 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PSMD8P48556 350 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 SEC24CP53992 1094 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 TATDN2Q93075 761 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ING3Q9NXR8 418 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 DLGAP2Q9P1A6 1054 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 RAD51BO15315 384 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PSIP1O75475 530 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ERAL1O75616 437 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 TOP3BO95985 862 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 CRY1Q16526 586 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 FBXO47Q5MNV8 452 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ZCCHC23Q6ZST2 131 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 HGH1Q9BTY7 390 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ZBTB14O43829 449 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 PREPLQ4J6C6 727 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 TBCELQ5QJ74 424 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 RASSF6Q6ZTQ3 369 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 NMD3Q96D46 503 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ZBTB10Q96DT7 871 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 GTPBP2Q9BX10 602 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 IMP3Q9NV31 184 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 DPP7Q9UHL4 492 aa18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 MTO1Q9Y2Z2 717 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-227ENST00000636549 C1DQ13901 141 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ZNHIT3Q15649 155 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TAF8Q7Z7C8 310 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ZNF280BQ86YH2 543 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ALDH8A1Q9H2A2 487 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TMEM138Q9NPI0 162 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 CD84Q9UIB8 345 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 MAFFQ9ULX9 164 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 PHTF1Q9UMS5 762 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TMA7Q9Y2S6 64 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 FOXN3O00409 490 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 MAT2AP31153 395 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 UBXN2BQ14CS0 331 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 NDUFAF6Q330K2 333 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 SYDE1Q6ZW31 735 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 PACS2Q86VP3 889 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 SLC2A14Q8TDB8 520 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 TBL1YQ9BQ87 522 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 MARCH7Q9H992 704 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ZFP14Q9HCL3 533 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 DYTNA2CJ06 578 aa18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 ATP5BP06576 529 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-227ENST00000636549 PRG2P13727 222 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms