RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 TM9SF3Q9HD45 589 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN11-206ENST00000635652 COX16Q9P0S2 106 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 PCOLCE2Q9UKZ9 415 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
PTPN11-206ENST00000635652 SNX11Q9Y5W9 270 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 NBEAQ8NFP9 2946 aa13.05□□□□□ -0.32
PTPN11-206ENST00000635652 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 F5H5T6 163 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 SRPRAP08240 638 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 C7P10643 843 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 CD27P26842 260 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 MTIF2P46199 727 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 NUMBP49757 651 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 CDK17Q00537 523 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 ECT2LQ008S8 904 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 APBA1Q02410 837 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 SUZ12Q15022 739 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 CST6Q15828 149 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 TPD52L1Q16890 204 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 EXOC3L4Q17RC7 722 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 PASD1Q8IV76 773 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 APCDD1Q8J025 514 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 SLCO3A1Q9UIG8 710 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 RALYQ9UKM9 306 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 APOBEC2Q9Y235 224 aaKnown RBP13.04□□□□□ -0.32
PTPN11-206ENST00000635652 ACACAQ13085 2346 aa13.04□□□□□ -0.32
PTPN11-206ENST00000635652 KNTC1P50748 2209 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 EDDM13A0A1B0GTR0 161 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 A0A1W2PP55 124 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 TARSL2A2RTX5 802 aaKnown RBP13.03□□□□□ -0.32
PTPN11-206ENST00000635652 BECN2A8MW95 431 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 KCNK3O14649 394 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 MID1O15344 667 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 CBFA2T3O75081 653 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 GRAP2O75791 330 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 RNASEH2AO75792 299 aaKnown RBP13.03□□□□□ -0.32
PTPN11-206ENST00000635652 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 SLC2A3P11169 496 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 ABCB4P21439 1286 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 CCR1P32246 355 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 SLC8A1P32418 973 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 NNMTP40261 264 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 GRIA4P48058 902 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 UBE2HP62256 183 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 EFHC1Q5JVL4 640 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 KIAA0895LQ68EN5 471 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 LAYNQ6UX15 382 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 SLCO6A1Q86UG4 719 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 CDC6Q99741 560 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 SYNCQ9H7C4 482 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 OSGEPQ9NPF4 335 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 SERGEFQ9UGK8 458 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 PCDHGB2Q9Y5G2 931 aa13.03□□□□□ -0.32
PTPN11-206ENST00000635652 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 LRRC72A6NJI9 287 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 SRRM3A6NNA2 597 aaPredicted RBP13.02□□□□□ -0.33
PTPN11-206ENST00000635652 FLRT2O43155 660 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 IGHV4-34P06331 123 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 GLI1P08151 1106 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 PDGFRAP16234 1089 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 PON1P27169 355 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 KRT9P35527 623 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 PSMD8P48556 350 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.33
PTPN11-206ENST00000635652 GALCP54803 685 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 C21orf59P57076 290 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 PTK2Q05397 1052 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 NME3Q13232 169 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 ARID5BQ14865 1188 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 RABGAP1LQ5R372 815 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 OR6B2Q6IFH4 312 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 NCEH1Q6PIU2 408 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 GLRX5Q86SX6 157 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 CIR1Q86X95 450 aaPredicted RBP13.02□□□□□ -0.33
PTPN11-206ENST00000635652 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.33
PTPN11-206ENST00000635652 STK40Q8N2I9 435 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 SHC3Q92529 594 aa13.02□□□□□ -0.33
PTPN11-206ENST00000635652 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms